Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_2439 |
Symbol | |
ID | 5456071 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 2640412 |
End bp | 2641806 |
Gene Length | 1395 bp |
Protein Length | 464 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640878015 |
Product | D-lactate dehydrogenase (cytochrome) |
Protein accession | YP_001413705 |
Protein GI | 154252881 |
COG category | [C] Energy production and conversion |
COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
TIGRFAM ID | [TIGR00387] glycolate oxidase, subunit GlcD |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 0.268315 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAGGG CAGCGGCGAG GGACGAGGGA AGGGTGGCGG CGCTTGGTGA ATTGCAGGCG CTTCTCGGCG ACCGGCTGAC GACAGCGGCT GCGATGCGCG AGGCTCATGG CCGCGACGAG AGCTGGCATG CCGTCGCGAT GCCCGATGCC GTCGCCTTCG CGCGGACGAC GGAGGAGGTC GCCGCCATCA TCCGCATCTG TTCCGCTTAC GACATGCCCG TCATCCCCTT CGGCGCGGGC ACCTCGCTTG AAGGCCATGT CTCCGCGGTG CATGGCGGCC TGTCGCTCGA TCTCTCGCAG ATGAATGCCA TTCTCGAGGT GAACGCGGCC GATCTCGATG TGCGGGTCGA GGCGGGCGTC ACGCGCAAGC AGCTCAACGA CTATCTGCGC GACACCGGAT TGTTCTTTCC CATCGACCCC GGCGCCAATG CCACCATCGG GGGCATGGTC GCGACGCGCG CGTCCGGTAC CAATGCAGTC CGCTACGGCA CCATGCGCGA AAACGTGCTG AACCTCACTG CCGTCATGGC GGACGGCTCG GTGGTGCGGA CCGCGCGGCG GGCCCGCAAG TCTTCCGCCG GCTATGACCT CACGCGGTTG CTGATCGGCT CCGAAGGCAC ACTCGGCATC GTCACCGAGG TGACGCTCCG GCTCTATGGC ATACCGGAAG CTATCCGTTC GGGCGTCGTC CCCTTCGCCA GCATCGAAGG CGCGGTCGAT GCCGTCATCG AGACCATCCA GTCGGGTTTG CCCGTCGCCC GCATCGAAAT TCTCGATCCC CTGTCGATCC GCGCCTGCAA CGCCTATTCC AAACTGACGC TCGCCGAAGT GCCGACCTTG TTTGTCGAGT TTCACGGCAC GGATGCCTCC GTCGCGGAAC AGGCGGAACG CTTCGGCGCC ATCGCTTCGG AGCATGGCGG CGGCGCGTCC GAATGGGCGA CGAAAGCCGA AGACCGCACG AAGCTCTGGG AAGCGCGCCA CAACGCCTAT TACGCCGCGC TCGCCTATGC GCCCGGCAAG AAGGGCATGG TCACCGATGT CTGCGTGCCG ATCTCGCGCC TCGCGGAAGC GATAAGGGGC ACGCTGGCCG ATCTCGAAAC CTCGTTCCTG AAAGCACCCA TCGTCGGCCA TGTCGGCGAC GGTAATTTCC ACATGCTGCT GCTGATGGAC CCCGCAAACC CGCAGGACCT CGCGGAAGCC ACCCGCCTCC ACGACCGCAT GGTCGCCCGC GCCCTCTCCC TCGACGGCAC CTGTACCGGC GAACACGGCA TCGGCGAGGG CAAGATCAAG TTCCTCGAAG CGGAGCACGG AACCGGCGTC GCCGTCATGC GCGCCATCAA ACAGGCGCTC GACCCGAAGG GGATTTTGAA CCCGGGGAAG ATATTTTCTG CCTGA
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Protein sequence | MSRAAARDEG RVAALGELQA LLGDRLTTAA AMREAHGRDE SWHAVAMPDA VAFARTTEEV AAIIRICSAY DMPVIPFGAG TSLEGHVSAV HGGLSLDLSQ MNAILEVNAA DLDVRVEAGV TRKQLNDYLR DTGLFFPIDP GANATIGGMV ATRASGTNAV RYGTMRENVL NLTAVMADGS VVRTARRARK SSAGYDLTRL LIGSEGTLGI VTEVTLRLYG IPEAIRSGVV PFASIEGAVD AVIETIQSGL PVARIEILDP LSIRACNAYS KLTLAEVPTL FVEFHGTDAS VAEQAERFGA IASEHGGGAS EWATKAEDRT KLWEARHNAY YAALAYAPGK KGMVTDVCVP ISRLAEAIRG TLADLETSFL KAPIVGHVGD GNFHMLLLMD PANPQDLAEA TRLHDRMVAR ALSLDGTCTG EHGIGEGKIK FLEAEHGTGV AVMRAIKQAL DPKGILNPGK IFSA
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