Gene Plav_2438 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_2438 
Symbol 
ID5456661 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp2639759 
End bp2640253 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content58% 
IMG OID640878014 
Producthypothetical protein 
Protein accessionYP_001413704 
Protein GI154252880 
COG category[R] General function prediction only 
COG ID[COG0824] Predicted thioesterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.395574 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value0.244804 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGCCC TCTTCACCGC CGGACAGCCA CTCGAATGCC CGCTTCGCAA GGTCGAGAAG 
CAATGGGTGG ATTTCAACGG ACATCTCAAC ATGGCCTATT ACCATGTGCT GTTCGATGAA
TCGCTGGACG TGGCTTTTAC CGGACTGGGC ATCGGCTGGG ATTATACCAA GCAGGGCGAA
GGCTCATGCT TCACGGCGGA GGTGCATGTC TGCTACCTGG ACGAGCTGAA GGAAGGCGAC
CCGGTTCGCA TCACTTATCA GTTACTCGAC GCAGACGAAA AACGCATCCA TGTCTTCGGC
CATATGTATC ACGCGGAGAA GGGCTATCTC GCCGCGACGA GCGAACAGAT GTGCATTCAC
GTCGACATGA AATCGCGCCG TGCCTCGCCC TTTCCCGACA TGCAGATGGG GCGGATCGCG
GAACTGATGA AGGCGCATGA GGGGATGACG CGGCCGGAAC AGGCAGGGCG GGTGATCGGG
ATAAAGCGGA AGTAG
 
Protein sequence
MTALFTAGQP LECPLRKVEK QWVDFNGHLN MAYYHVLFDE SLDVAFTGLG IGWDYTKQGE 
GSCFTAEVHV CYLDELKEGD PVRITYQLLD ADEKRIHVFG HMYHAEKGYL AATSEQMCIH
VDMKSRRASP FPDMQMGRIA ELMKAHEGMT RPEQAGRVIG IKRK