Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_2438 |
Symbol | |
ID | 5456661 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | - |
Start bp | 2639759 |
End bp | 2640253 |
Gene Length | 495 bp |
Protein Length | 164 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640878014 |
Product | hypothetical protein |
Protein accession | YP_001413704 |
Protein GI | 154252880 |
COG category | [R] General function prediction only |
COG ID | [COG0824] Predicted thioesterase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.395574 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 0.244804 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGCCC TCTTCACCGC CGGACAGCCA CTCGAATGCC CGCTTCGCAA GGTCGAGAAG CAATGGGTGG ATTTCAACGG ACATCTCAAC ATGGCCTATT ACCATGTGCT GTTCGATGAA TCGCTGGACG TGGCTTTTAC CGGACTGGGC ATCGGCTGGG ATTATACCAA GCAGGGCGAA GGCTCATGCT TCACGGCGGA GGTGCATGTC TGCTACCTGG ACGAGCTGAA GGAAGGCGAC CCGGTTCGCA TCACTTATCA GTTACTCGAC GCAGACGAAA AACGCATCCA TGTCTTCGGC CATATGTATC ACGCGGAGAA GGGCTATCTC GCCGCGACGA GCGAACAGAT GTGCATTCAC GTCGACATGA AATCGCGCCG TGCCTCGCCC TTTCCCGACA TGCAGATGGG GCGGATCGCG GAACTGATGA AGGCGCATGA GGGGATGACG CGGCCGGAAC AGGCAGGGCG GGTGATCGGG ATAAAGCGGA AGTAG
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Protein sequence | MTALFTAGQP LECPLRKVEK QWVDFNGHLN MAYYHVLFDE SLDVAFTGLG IGWDYTKQGE GSCFTAEVHV CYLDELKEGD PVRITYQLLD ADEKRIHVFG HMYHAEKGYL AATSEQMCIH VDMKSRRASP FPDMQMGRIA ELMKAHEGMT RPEQAGRVIG IKRK
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