| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2430 |
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| Symbol | |
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| ID | 5453506 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 2626208 |
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| End bp | 2627083 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640878006 |
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| Product | DNA uptake lipoprotein |
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| Protein accession | YP_001413696 |
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| Protein GI | 154252872 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4105] DNA uptake lipoprotein |
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| TIGRFAM ID | [TIGR03302] outer membrane assembly lipoprotein YfiO |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.233746 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 65 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGACTTTG CCCGAATGAG TGAGGCCAAC CTGCCCATCC GACGTCACAC AGGTTCATCG
CTGCCGTATT TCCGCGCCGC CCTTGCGGGC GCGCTGGCGC TTGCGGTGGC CGGGCTGGCG
GGGTGTTCCT CCGACGACGA GCTTCCCTAT GAAGAGCGGC CGGTCGAGCA GATCTACAAC
AAGGCGATGG ACCACATGGC GGCGGGCGAC TACATCCCCG CGGCGAAGGA GTTCGACGAG
GTCGAGCGCC AGCATCCCTA TTCGGAATGG GCGCGCCGCT CGATGCTGAT GAGCGCCTAT
GCGCACTACA AGATCAACGA ATATGACGAG GCGATCCTCA GCGCGCAGCG TTTCATCTCG
CTGCATCCGA GCAACAAGGA TGTGCCTTAC GCCTATTATC TGATCGGGCT GAGCTATTAC
GAGCGGATTT CGGATGTGGG CCGCGACCAG AAGATGACCG AAAACGCGCT CAACTCGTTC
TACGAACTGA CGCAGCGTTT CCCCTCCAGC GAATATTCGC GCGATGCGCG CCTGAAGATC
GACCTCACGC TCGATCATCT CGCCGGCAAG GAAATGGAAA TCGGCCGCTA CTATCTCATT
CGCCGCGACT ATGTTGCCGC CATCAACCGC TTCCGTGTCG TTATCGAAAA ATACCAGACG
ACGACGCACA CGCCCGAAGC ACTGGAACGG CTGACGGAAG CCTATCTCGC GCTTGGTGTC
AAAACCGAAG CGCAGACGGC GGCGGCGATC CTCGGCTACA ATTATCCCGG CAGCGACTGG
TATGAAGACA GCTATGCGAT GCTGTCCAAC GAGGGACTGG AGCCGGTGGA GAACAAGGAT
TCCTGGATCA GCAGGACATG GAACTCCGTT TTCTGA
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| Protein sequence | MDFARMSEAN LPIRRHTGSS LPYFRAALAG ALALAVAGLA GCSSDDELPY EERPVEQIYN
KAMDHMAAGD YIPAAKEFDE VERQHPYSEW ARRSMLMSAY AHYKINEYDE AILSAQRFIS
LHPSNKDVPY AYYLIGLSYY ERISDVGRDQ KMTENALNSF YELTQRFPSS EYSRDARLKI
DLTLDHLAGK EMEIGRYYLI RRDYVAAINR FRVVIEKYQT TTHTPEALER LTEAYLALGV
KTEAQTAAAI LGYNYPGSDW YEDSYAMLSN EGLEPVENKD SWISRTWNSV F
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