Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_2428 |
Symbol | |
ID | 5453468 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | - |
Start bp | 2622755 |
End bp | 2624668 |
Gene Length | 1914 bp |
Protein Length | 637 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640878004 |
Product | acyltransferase 3 |
Protein accession | YP_001413694 |
Protein GI | 154252870 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1835] Predicted acyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.000222239 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 65 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGTGC CTTACCGACC CTCAGTCGAC GGCCTGCGCG CTGTCGCCGT TATCTCCGTT ATGCTGTTTC ACGCCGAAGT GCCGGGCTTC TCAGGCGGCT TTGTCGGTGT AGATGTATTT TTTGTGATCA GCGGCTATTT GATCACGGGC ATCATTCTAC AGCAGCAGGC GACGAAATCG TTTTCCCTGC TCCACTTCTA CGAACGGCGG GCGCGGCGCA TCCTGCCTGC CCTCTTCCTG ATCATGTCCG TAACTCTCGT TGCCGCTGCT TTGCTCACGG CGCCGTTCCG CTTTGCCGAA ATTGCGGAAT CGGCGGCGGC CGCGCTGTCC TTCACGGCAA ACATCTATTT CTGGGCAAGC AGCGACTATT TCGCGACGGC GGCCCGTATC CAGCCTCTCA TTCACACCTG GTCGCTCGGC GTCGAGGAGC AGTTCTACAT CGTCTTTCCG CTCCTAATGC TCGTCTTCGC GCGGGCGAAG CGGGCCTCGC TCGGCATTGC TATCTCGAGC CTCGCAATCG CATCGCTGAT CGTCAGCGAG ATCATGGCCC GGCATCATCC GAACGCCGCC TTTTACCTGC CGCACTCGCG CGCATACGAA CTGCTTGCTG GATCCCTGAT CGCATTGTAC CGGCCGACCG GCGACACATT GGGGCCCCGA ATAAGCGCCG TGCTTCGGGC AAGCGGTGCA ATAATGATTG CAGCTTCGGT GGGAACCTAT CACGAGGGCA TGGTTCTGCC AGGCTTTGCC ATGCTCCTGC CCGTGCTGGG AGTGGCGCTC ATGCTCCTTG CCGATGACCG CGATGAGCCG CTTGCACAGG CGCTCTCCTG GCGGCCATTG GTCTTCGTCG GATTGTGCTC ATACTCATTA TATCTTTGGC ACCAGCCGAT ATTAGCCCTC GCAAGAATTG CCACCACCGA TCATCTCAAT CTCGGTGGCA GCATTGTCAT TCTTGCGCTG TGCGTCCCGC TTTCGTGGCT CTCATGGCGC TATGTCGAAC AGCCGTTCCG CGACGGCAGA AAAATAAATA TCAAGCCGTT CGTACTCACG GCAAGCGGTG TCGGCGCCGC CATACTCGCA ACGAGCGCGG TAATGATACA GACGCGCGGA CTTGAGTTCA TGGCGCGCCC TGAATATGTC GATATGCAGG CTCATTTCGA CCGCGGCGGA AAAGAGCGGG CCGAAGGCAT TCATTTGAGC ACATGCCATT TCCGCAGCGA CACCGGCTCG CCCGACCTCT TCCTGAAGCA GTGGAACTGC CTCGGCAGCG GAAAAGGCGC TTCGGTGTTA ATCCTCGGCG ACAGCCATGC AGCCGACAAG GCCTTCGCGT TGCGCGCCGT CGGTATCGAA CCCGCTCAAA TGACGGCGCC CGGCTGCGGT ATCGTTCAAC ACGCGTTTTC AGAACACTGT CTCGCCTTGT ACCGTACCGC GATAGAACGC CTGAAGGACC GCCCCGACCT TCGAATCCTG TTCACCCAAT CCGTCACTCA TCACCCGCTG ACTAAAGACG ATATCGCCAC AGCGGCGGAG CTGTTCAAAT CGTTCGGCAG GACCGTCGTC TGGCTGTCGC CCATGCCTTC ATTCCCGAAC ATTCGCGACG AGATGGCAAA TCGTGCTTTA AGTGGCAACA ATCCATTCTC CGGCACATAT CCGTTTAAGA ATGACGCCGC CGTGAGCGCA AAGGCCCTGA TGGTCGAGGT AGCCACCGAC GGCGCCGTAT TTGATACGCA GAAAGCATTT TGCGAAGCGG GTGAGATCGA GCCGTGCAGC CCCTACGCCA AACAGGACCT GCTGCTGGTC GATCAGGACC ATGTTTCCTC AGCCGGAGCA CGCGCAATCG GTGCAGCCAT GAGCCTCTTC CTGTTCGGCG AGGCAGCCCC CGCGGGCGGG GCCAAGGCCG TTCCCGCACC CTGA
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Protein sequence | MTVPYRPSVD GLRAVAVISV MLFHAEVPGF SGGFVGVDVF FVISGYLITG IILQQQATKS FSLLHFYERR ARRILPALFL IMSVTLVAAA LLTAPFRFAE IAESAAAALS FTANIYFWAS SDYFATAARI QPLIHTWSLG VEEQFYIVFP LLMLVFARAK RASLGIAISS LAIASLIVSE IMARHHPNAA FYLPHSRAYE LLAGSLIALY RPTGDTLGPR ISAVLRASGA IMIAASVGTY HEGMVLPGFA MLLPVLGVAL MLLADDRDEP LAQALSWRPL VFVGLCSYSL YLWHQPILAL ARIATTDHLN LGGSIVILAL CVPLSWLSWR YVEQPFRDGR KINIKPFVLT ASGVGAAILA TSAVMIQTRG LEFMARPEYV DMQAHFDRGG KERAEGIHLS TCHFRSDTGS PDLFLKQWNC LGSGKGASVL ILGDSHAADK AFALRAVGIE PAQMTAPGCG IVQHAFSEHC LALYRTAIER LKDRPDLRIL FTQSVTHHPL TKDDIATAAE LFKSFGRTVV WLSPMPSFPN IRDEMANRAL SGNNPFSGTY PFKNDAAVSA KALMVEVATD GAVFDTQKAF CEAGEIEPCS PYAKQDLLLV DQDHVSSAGA RAIGAAMSLF LFGEAAPAGG AKAVPAP
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