Gene Plav_2428 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_2428 
Symbol 
ID5453468 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp2622755 
End bp2624668 
Gene Length1914 bp 
Protein Length637 aa 
Translation table11 
GC content59% 
IMG OID640878004 
Productacyltransferase 3 
Protein accessionYP_001413694 
Protein GI154252870 
COG category[I] Lipid transport and metabolism 
COG ID[COG1835] Predicted acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000222239 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones65 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGTGC CTTACCGACC CTCAGTCGAC GGCCTGCGCG CTGTCGCCGT TATCTCCGTT 
ATGCTGTTTC ACGCCGAAGT GCCGGGCTTC TCAGGCGGCT TTGTCGGTGT AGATGTATTT
TTTGTGATCA GCGGCTATTT GATCACGGGC ATCATTCTAC AGCAGCAGGC GACGAAATCG
TTTTCCCTGC TCCACTTCTA CGAACGGCGG GCGCGGCGCA TCCTGCCTGC CCTCTTCCTG
ATCATGTCCG TAACTCTCGT TGCCGCTGCT TTGCTCACGG CGCCGTTCCG CTTTGCCGAA
ATTGCGGAAT CGGCGGCGGC CGCGCTGTCC TTCACGGCAA ACATCTATTT CTGGGCAAGC
AGCGACTATT TCGCGACGGC GGCCCGTATC CAGCCTCTCA TTCACACCTG GTCGCTCGGC
GTCGAGGAGC AGTTCTACAT CGTCTTTCCG CTCCTAATGC TCGTCTTCGC GCGGGCGAAG
CGGGCCTCGC TCGGCATTGC TATCTCGAGC CTCGCAATCG CATCGCTGAT CGTCAGCGAG
ATCATGGCCC GGCATCATCC GAACGCCGCC TTTTACCTGC CGCACTCGCG CGCATACGAA
CTGCTTGCTG GATCCCTGAT CGCATTGTAC CGGCCGACCG GCGACACATT GGGGCCCCGA
ATAAGCGCCG TGCTTCGGGC AAGCGGTGCA ATAATGATTG CAGCTTCGGT GGGAACCTAT
CACGAGGGCA TGGTTCTGCC AGGCTTTGCC ATGCTCCTGC CCGTGCTGGG AGTGGCGCTC
ATGCTCCTTG CCGATGACCG CGATGAGCCG CTTGCACAGG CGCTCTCCTG GCGGCCATTG
GTCTTCGTCG GATTGTGCTC ATACTCATTA TATCTTTGGC ACCAGCCGAT ATTAGCCCTC
GCAAGAATTG CCACCACCGA TCATCTCAAT CTCGGTGGCA GCATTGTCAT TCTTGCGCTG
TGCGTCCCGC TTTCGTGGCT CTCATGGCGC TATGTCGAAC AGCCGTTCCG CGACGGCAGA
AAAATAAATA TCAAGCCGTT CGTACTCACG GCAAGCGGTG TCGGCGCCGC CATACTCGCA
ACGAGCGCGG TAATGATACA GACGCGCGGA CTTGAGTTCA TGGCGCGCCC TGAATATGTC
GATATGCAGG CTCATTTCGA CCGCGGCGGA AAAGAGCGGG CCGAAGGCAT TCATTTGAGC
ACATGCCATT TCCGCAGCGA CACCGGCTCG CCCGACCTCT TCCTGAAGCA GTGGAACTGC
CTCGGCAGCG GAAAAGGCGC TTCGGTGTTA ATCCTCGGCG ACAGCCATGC AGCCGACAAG
GCCTTCGCGT TGCGCGCCGT CGGTATCGAA CCCGCTCAAA TGACGGCGCC CGGCTGCGGT
ATCGTTCAAC ACGCGTTTTC AGAACACTGT CTCGCCTTGT ACCGTACCGC GATAGAACGC
CTGAAGGACC GCCCCGACCT TCGAATCCTG TTCACCCAAT CCGTCACTCA TCACCCGCTG
ACTAAAGACG ATATCGCCAC AGCGGCGGAG CTGTTCAAAT CGTTCGGCAG GACCGTCGTC
TGGCTGTCGC CCATGCCTTC ATTCCCGAAC ATTCGCGACG AGATGGCAAA TCGTGCTTTA
AGTGGCAACA ATCCATTCTC CGGCACATAT CCGTTTAAGA ATGACGCCGC CGTGAGCGCA
AAGGCCCTGA TGGTCGAGGT AGCCACCGAC GGCGCCGTAT TTGATACGCA GAAAGCATTT
TGCGAAGCGG GTGAGATCGA GCCGTGCAGC CCCTACGCCA AACAGGACCT GCTGCTGGTC
GATCAGGACC ATGTTTCCTC AGCCGGAGCA CGCGCAATCG GTGCAGCCAT GAGCCTCTTC
CTGTTCGGCG AGGCAGCCCC CGCGGGCGGG GCCAAGGCCG TTCCCGCACC CTGA
 
Protein sequence
MTVPYRPSVD GLRAVAVISV MLFHAEVPGF SGGFVGVDVF FVISGYLITG IILQQQATKS 
FSLLHFYERR ARRILPALFL IMSVTLVAAA LLTAPFRFAE IAESAAAALS FTANIYFWAS
SDYFATAARI QPLIHTWSLG VEEQFYIVFP LLMLVFARAK RASLGIAISS LAIASLIVSE
IMARHHPNAA FYLPHSRAYE LLAGSLIALY RPTGDTLGPR ISAVLRASGA IMIAASVGTY
HEGMVLPGFA MLLPVLGVAL MLLADDRDEP LAQALSWRPL VFVGLCSYSL YLWHQPILAL
ARIATTDHLN LGGSIVILAL CVPLSWLSWR YVEQPFRDGR KINIKPFVLT ASGVGAAILA
TSAVMIQTRG LEFMARPEYV DMQAHFDRGG KERAEGIHLS TCHFRSDTGS PDLFLKQWNC
LGSGKGASVL ILGDSHAADK AFALRAVGIE PAQMTAPGCG IVQHAFSEHC LALYRTAIER
LKDRPDLRIL FTQSVTHHPL TKDDIATAAE LFKSFGRTVV WLSPMPSFPN IRDEMANRAL
SGNNPFSGTY PFKNDAAVSA KALMVEVATD GAVFDTQKAF CEAGEIEPCS PYAKQDLLLV
DQDHVSSAGA RAIGAAMSLF LFGEAAPAGG AKAVPAP