| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2422 |
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| Symbol | murC |
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| ID | 5454532 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 2615225 |
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| End bp | 2616700 |
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| Gene Length | 1476 bp |
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| Protein Length | 491 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640877998 |
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| Product | UDP-N-acetylmuramate--L-alanine ligase |
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| Protein accession | YP_001413688 |
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| Protein GI | 154252864 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0773] UDP-N-acetylmuramate-alanine ligase |
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| TIGRFAM ID | [TIGR01082] UDP-N-acetylmuramate--alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.20776 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 64 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGCCCGG CACCTCTCGA CATCGGCAAT ATCCATTTCG TCGGCATCGG CGGCATCGGC
ATGAGCGGCA TTGCCGAAGT CATGCACAAT CTCGGCTACA CGGTCCAGGG CAGCGATCTT
GCCGACAGCG CCAATGTGAA GCGGTTGAAA GGCCTTGGCA TCAAGGTCTT CATCGGACAG
AAGGCGGAAA ACCTCGCGGA AGCGCAAGTC ATTGTGGTGT CGTCCGCCAT TCGCGCCGAC
AATCCCGAAC TGATGGAAGC CCGCGCGCGC TTTCTTCCTG TCGTGCGCCG CGCCGAAATG
CTGGCGGAGC TCATGCGTCT CAAGAGCTGC GTCGCCATCG GCGGCACGCA TGGCAAGACG
ACGACGACAT CGCTCGTCGC GGCCATTCTC GACAAGGCGG GGCTCGACCC GACCGTCATC
AATGGCGGCA TCATCAATGC CTATGGCACG AATGCGCGGC TCGGCGGCGG CGAGTGGATG
GTGGTCGAGG CCGATGAATC CGACGGCACC TTCGTGAAGC TGCCCGCGAC CATCGCCATC
GTCACCAATA TTGACCCGGA ACATCTCGAC TATTACGGCA GCTTCGACGC CGCGAAGGAC
GCCTTCCTCG CTTTCGTCGA AAACGTGCCG TTCTACGGCG CCGCCGTGAT GTGCATCGAT
CATCCGGAAG TGCAGGCGCT GATCGGCCGC GTGCGCGACC GGCGCATCGT GACCTACGGC
ACCAATCCGC AGGCCGATAT CCGCGCCACC AATGCGCGCG TCGAAGACGG TTTCAATGTG
TTCGACGTCG CCATCACCGA CCGCAAGACG GGTACCGCGC GCGAGATGAC GGGCGTGCGC
CTCGCCATGC ACGGCACGCA TAATATGCTG AACAGCCTCG CGGCTATCGG CGTTGCGACG
CAGATGGGCA TTGCGGACGA CAAGATCCGC GCGGCGCTGG AAGGTTTCGG CGGCGTGAAG
CGGCGCTTCA CGTTTGTGGG AAGCTGGAAC GACGTCAACA TCTATGACGA CTACGGCCAC
CATCCCGTCG AGATCGCGGC GGTGCTGCAG GCGGCGCGCT CCGCCACCAA GGGCCGCACC
ATCGCCGTGG TGCAGCCGCA TCGCTATACG CGGCTTCACA ATCTCTTCGA CGAATTCTGC
GCCTGCTTCA ACGATGCCGA TGCAGTGATC GTGGCCGATG TCTATGAAGC GGGCGAGAAG
CCCATCGAGG GCGCGAGCCG CGATGCGCTG GTCGAAGGCC TGCGCGACCG TGGACATCGC
AACGTGATGG CGCTTGACGG GCCTGAAGCC CTGCCGCGTC TGATCGCCGA AACCGCCAGG
CCGGGCGACC TTGTCGTTTG CCTCGGCGCG GGCAGCATCA CCTATTGGGC AAACGCGCTG
CCGGACGATC TGGCGAAGCT CGGCGGAAAG AAGAAAGCCG CCGCGAAGAG CGCAGCGAAG
ACCAAGGCGA AGCCGAAAAA AGGGAGGGGG AAATGA
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| Protein sequence | MRPAPLDIGN IHFVGIGGIG MSGIAEVMHN LGYTVQGSDL ADSANVKRLK GLGIKVFIGQ
KAENLAEAQV IVVSSAIRAD NPELMEARAR FLPVVRRAEM LAELMRLKSC VAIGGTHGKT
TTTSLVAAIL DKAGLDPTVI NGGIINAYGT NARLGGGEWM VVEADESDGT FVKLPATIAI
VTNIDPEHLD YYGSFDAAKD AFLAFVENVP FYGAAVMCID HPEVQALIGR VRDRRIVTYG
TNPQADIRAT NARVEDGFNV FDVAITDRKT GTAREMTGVR LAMHGTHNML NSLAAIGVAT
QMGIADDKIR AALEGFGGVK RRFTFVGSWN DVNIYDDYGH HPVEIAAVLQ AARSATKGRT
IAVVQPHRYT RLHNLFDEFC ACFNDADAVI VADVYEAGEK PIEGASRDAL VEGLRDRGHR
NVMALDGPEA LPRLIAETAR PGDLVVCLGA GSITYWANAL PDDLAKLGGK KKAAAKSAAK
TKAKPKKGRG K
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