| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2418 |
|---|
| Symbol | |
|---|
| ID | 5454664 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | + |
|---|
| Start bp | 2610394 |
|---|
| End bp | 2611482 |
|---|
| Gene Length | 1089 bp |
|---|
| Protein Length | 362 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640877994 |
|---|
| Product | phospho-N-acetylmuramoyl-pentapeptide- transferase |
|---|
| Protein accession | YP_001413684 |
|---|
| Protein GI | 154252860 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0472] UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase |
|---|
| TIGRFAM ID | [TIGR00445] phospho-N-acetylmuramoyl-pentapeptide-transferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.0289856 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 56 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCTACG ATCTTCTCGG CGGCATGGCG GGCGACATTC AGGCACTCAA TGTCTTTCGC
TACATCACCT TCCGCACCGG CGGCGCGACG GTGACGGCGC TGCTCATCAG CTTCCTGTTC
GGGCCGCGCA TCATCGCTCT GCTGAAGGCC AAGCAGCGGC GCGGCCAGCC GATCCGCGAG
GACGGGCCGC AGACCCATAT CATCCAGAAG CAGGGCACGC CGACGATGGG CGGCTTTCTC
ATTCTCGTCG GGCTCGTTCC CTCGGTGCTG CTGTGGGCGG ACTGGAGCAA CCGCTATGTC
TGGATCGTTC TCTTCGTGAC GCTCGGCTTC GGCGCGGTGG GTTTTGCAGA CGACTATCTG
AAGGTTTCGA AGATTTCGCC GAAAGGCGTG CCTGGCCGCG TGAAGCTCTT TTTCGAATTC
GTGATTGCGC TGATCGCGAT GTGGGCGCTG GTGCTTGTGT CGAGCGAGCC GCTGCAGACG
GCGCTGACGG TGCCGTTCTT CAAAACGCTG TTGATCGAGC TTGGCGGATT TTTCTTTCTC
TTCGGCGCGC TGGTGATCGT CGGATCGTCC AATGCGGTGA ACCTAACCGA CGGGCTCGAC
GGGCTTGCCA TCGTGCCGGT GATGATCGCG GCGGCGTCTC TCGGGCTTAT CGTCTATCTC
GTCGGCAATG CGGTGTTCGC GGATTACCTG CAGATCCATT TCGTGCCGGG GACGGGCGAG
CTTGCGGTCT TCTGCGGGGC GCTGATCGGG GCGGGGCTCG GTTTCCTCTG GTACAACGCG
CCGCCCGCCA TGGTGTTCAT GGGCGACACG GGCTCGCTTG CGCTTGGCGG CGCGCTCGGC
GCGATTGCGG TGGCGGCGAA GCACGAGCTG GTACTGGCAA TCATCGGCGG GCTTTTCGTG
CTCGAAGCGG TGTCGGTCAT CGTGCAGGTG GCATCGTTCA AGCTAACCGG CAAGCGCGTC
TTCCGGATGG CGCCGCTGCA TCATCATTTC GAACAGAAGG GCTGGGCGGA ACCGACCGTC
GTCGTGCGCT TCTGGATCAT CTCCGTCGTG CTCGCCATGG CGGGCCTCGC CACATTGAAG
TTGAGGTGA
|
|---|
| Protein sequence | MLYDLLGGMA GDIQALNVFR YITFRTGGAT VTALLISFLF GPRIIALLKA KQRRGQPIRE
DGPQTHIIQK QGTPTMGGFL ILVGLVPSVL LWADWSNRYV WIVLFVTLGF GAVGFADDYL
KVSKISPKGV PGRVKLFFEF VIALIAMWAL VLVSSEPLQT ALTVPFFKTL LIELGGFFFL
FGALVIVGSS NAVNLTDGLD GLAIVPVMIA AASLGLIVYL VGNAVFADYL QIHFVPGTGE
LAVFCGALIG AGLGFLWYNA PPAMVFMGDT GSLALGGALG AIAVAAKHEL VLAIIGGLFV
LEAVSVIVQV ASFKLTGKRV FRMAPLHHHF EQKGWAEPTV VVRFWIISVV LAMAGLATLK
LR
|
|---|
| |