| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2416 |
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| Symbol | |
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| ID | 5456645 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 2607510 |
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| End bp | 2608958 |
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| Gene Length | 1449 bp |
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| Protein Length | 482 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640877992 |
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| Product | UDP-N-acetylmuramyl-tripeptide synthetase |
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| Protein accession | YP_001413682 |
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| Protein GI | 154252858 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0769] UDP-N-acetylmuramyl tripeptide synthase |
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| TIGRFAM ID | [TIGR01085] UDP-N-acetylmuramyl-tripeptide synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.233547 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGCGGCGT TGATGGGGTC AGGTCCCGCG CTTCCCGAAG GGGGGGCGAC GGAGATACTC
GGCCTGACGG CGGACAGCCG CGCGGTGCGC CCCGGTTATC TCTTCGCGGC GCTGCCCGGC
ACGAAGCTCG ACGGAACGAA ATTCATCGCC CAGGCCATCG AAAAAGGTGC CGCCGCGCTG
CTGGTGCCGC TCGATGCGGC GGTGGCGGCG AATGTGCCGG TGATCGCGGA TCGCAATCCA
CGCCGCCGGT TGGCGCTGAT GGCGGCCGCA TTCTTCGGCG ACCAGCCGCG CACCGTGGCG
GCGGTGACGG GAACCAACGG CAAGACATCC ATCGCGACCT TCCTGCGCGA AATCTGGGCC
GCGCTCGGCG AAGAGGCGGC AAGCCTCGGC ACGCTTGGCG TCACCAGCGC GAAGGGCGAG
CGGTCGCTCG GCTATACAAC GCCCGATCCC GTGGCGCTGC AGGCGGAGCT GGCGGCGCTG
GCGAAAGAAG GCGTGACGCA TCTGGCGATG GAAGCATCGA GCCACGGGCT TGCACAATAC
AGGCTCGACG GCGTGAAGCT GCGCGCGGCG GGCTTCACCA ATATCACGCG CGATCACATG
GACTATCACA CCAGCTTCGA CGACTACCTC TATGCGAAGC TGCGCCTTTT CGGCGAGGTG
ATGGGACCGG GCGGCATCGC CGTGCTCAAT GCCGACAGCG CGCAATATGC TGAATTCGAA
GCCGTGTGCT GGGCGCGCGG GCATCGCATC ATCTCCGTCG GGCGGAAGGG CAAGGGCATT
TTCCTCGCCG CCGCGCGGCC GACGCCACGC GGGCAGACGC TGGAGCTGGT GCATGAGGGA
AAGAATTATG CCGTGAACCT GCCGCTGGTC GGCGGCTTCC AGGCATCGAA CGCGCTGGTG
GCGGCGGGGC TGGCCATAGG CTGCGGCGGC GCGGCGGAGA AGGTTTTCGC GGCGCTCGAG
AAGCTGACGG GCGCAAAGGG GCGGATGGAA GAGGCGGCGC ATCTGCCGAA CGGCGCTTCC
GTCTATATCG ATTACGCCCA TACGCCGGAC GCGCTCGAAA ACGCGCTGGA GGCGATCCGC
CCGCATACGG CGGGAAGGCT TTCCATCGTG TTCGGCTGCG GCGGCGACCG GGACGCAGGC
AAGCGGCCGC TGATGGGCGC CGCGGCAGCG AAACTTGCCG ACATTATATA TGTGACCGAC
GACAATCCGC GCAGCGAGGC GGCGGATGCA ATCCGCGCGG CCGTGCTCAA AGGCTGTCCG
GGGGCGATCG AGATCGGCGA CAGGGCAGCG GCCATCGAAA CGGCGATGCG GGCGCTGCAG
CCGGGCGACG TTCTCGTGGT GGCGGGGAAA GGCCATGAGA CCGGGCAGAT CGTCGGCGAC
AAGGTGCTGC CGTTCTCCGA CCATGAGGCG ATCCGCGAGG CAGCGAAGAA AATAGGAGGT
GCCGCATGA
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| Protein sequence | MAALMGSGPA LPEGGATEIL GLTADSRAVR PGYLFAALPG TKLDGTKFIA QAIEKGAAAL
LVPLDAAVAA NVPVIADRNP RRRLALMAAA FFGDQPRTVA AVTGTNGKTS IATFLREIWA
ALGEEAASLG TLGVTSAKGE RSLGYTTPDP VALQAELAAL AKEGVTHLAM EASSHGLAQY
RLDGVKLRAA GFTNITRDHM DYHTSFDDYL YAKLRLFGEV MGPGGIAVLN ADSAQYAEFE
AVCWARGHRI ISVGRKGKGI FLAAARPTPR GQTLELVHEG KNYAVNLPLV GGFQASNALV
AAGLAIGCGG AAEKVFAALE KLTGAKGRME EAAHLPNGAS VYIDYAHTPD ALENALEAIR
PHTAGRLSIV FGCGGDRDAG KRPLMGAAAA KLADIIYVTD DNPRSEAADA IRAAVLKGCP
GAIEIGDRAA AIETAMRALQ PGDVLVVAGK GHETGQIVGD KVLPFSDHEA IREAAKKIGG
AA
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