Gene Plav_2412 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_2412 
Symbol 
ID5454555 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp2603811 
End bp2604296 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content63% 
IMG OID640877988 
Producthypothetical protein 
Protein accessionYP_001413678 
Protein GI154252854 
COG category[S] Function unknown 
COG ID[COG2001] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR00242] mraZ protein 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.706299 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones62 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTCGT TCCGGGGGCG TTACACGAAC AAGATCGACT CGAAGGGACG CGTTTCCGTT 
CCTGCGAAGT TTCGTGCCGT CTCGATCGCC CAGGGACTCA ACGGGATCAT CTGCTTTCCG
CCGTTGAGCG AGGGCAAGTT CATCGAGGGC TGCGGCCCCG CCTTTTCCGA AGAAATCGAC
CGAATGCTCG ACCGGCTGGA CCCGTTCTCC GAGGAGCGCG ACATGCTTGC CTCCGTGCTG
CTCGGCGAGA GCGCGGAGCT GATGTTCGAC GCGGATGGAC GCGTGAACCT GCCGGACAAT
CTGCGCGAAC TGGCCGGGCT CACCGATGAG GTGGTTTTCG TCGGTGCCGG CCCGCGCTTC
CAGATCTGGG AACCCGGCGC TTATGCGGCC TTTGCGGTCG AGGCGCAGAA ACGGGTTCCG
GGCTTCCGCG AATTGCTGAA ATCAACACAA GCTTCCCTGC GACCTGAGGG CGGGGGCGGC
CGATGA
 
Protein sequence
MNSFRGRYTN KIDSKGRVSV PAKFRAVSIA QGLNGIICFP PLSEGKFIEG CGPAFSEEID 
RMLDRLDPFS EERDMLASVL LGESAELMFD ADGRVNLPDN LRELAGLTDE VVFVGAGPRF
QIWEPGAYAA FAVEAQKRVP GFRELLKSTQ ASLRPEGGGG R