| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2410 |
|---|
| Symbol | |
|---|
| ID | 5455849 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | + |
|---|
| Start bp | 2601235 |
|---|
| End bp | 2601978 |
|---|
| Gene Length | 744 bp |
|---|
| Protein Length | 247 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640877985 |
|---|
| Product | N-acetylmuramoyl-L-alanine amidase |
|---|
| Protein accession | YP_001413676 |
|---|
| Protein GI | 154252852 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG3023] Negative regulator of beta-lactamase expression |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 62 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACATTC CTTGCACGGA GCGGCCTTCA CCCAATTTCA ACGAGCGGCC GGCGGGCCGC
GCTGTCGATA TTCTGCTGCT GCATTATACC GGCATGGAAA GCGGCGAGGC CGCGGCCTCG
CGGCTATGCG ATGCGGCGGC GAAGGTCTCC GCACATTATC TCGTCGATGA GGATGGAGCG
GTCACACGCA TGGTGCCGGA GCATCTGCGC GCCTGGCATG CGGGTGTCGG CAACTGGGCA
GGCGAGACCG ATATCAACGG ATGTTCGATC GGCATCGAGA TCGTCAATGG CGGGCATGAT
TTCGGCTGTC CGCCTTATCC CGAAGCGCAG ATGAAAGCGG TGGAAGCCCT TTCGCTTGAA
ATTCTTTCCC GCCATCCGAT ACAGGCGCGG CGCGTGCTCG CCCATTCGGA TATCGCGCCG
GCGCGAAAGG CGGACCCGGG CGAATGGTTC GACTGGGCAA GGCTCGCGCG TGCTGGCGTG
GGTGTCTGGG TCGAACCGGA GCCTGTCGGA GAAGGACCCG TTCTTCGCGA GGGAGACCGT
GGAGACACGG TTGCGGAGTT GCAATATCTG CTCGCCGATT ACGGCTACGG GCTTGAAGTG
CTTGGCCGGT ACGACGAAGC GACGAAGGCT GTCGTGACGG CATTTCAGCG TCACTTCCGT
CCTCAAAAAG TCGACGGGGT GGCGGATGTT TCCACCGTCA CCACGCTCCG CCGGCTTCTC
GAGGCCGTGA AGTCCCTCGC TTAA
|
|---|
| Protein sequence | MHIPCTERPS PNFNERPAGR AVDILLLHYT GMESGEAAAS RLCDAAAKVS AHYLVDEDGA
VTRMVPEHLR AWHAGVGNWA GETDINGCSI GIEIVNGGHD FGCPPYPEAQ MKAVEALSLE
ILSRHPIQAR RVLAHSDIAP ARKADPGEWF DWARLARAGV GVWVEPEPVG EGPVLREGDR
GDTVAELQYL LADYGYGLEV LGRYDEATKA VVTAFQRHFR PQKVDGVADV STVTTLRRLL
EAVKSLA
|
|---|
| |