Gene Plav_2400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_2400 
Symbol 
ID5454006 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand+ 
Start bp2587383 
End bp2588375 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content64% 
IMG OID640877975 
Productmethyltransferase type 11 
Protein accessionYP_001413666 
Protein GI154252842 
COG category[H] Coenzyme transport and metabolism
[K] Transcription 
COG ID[COG0640] Predicted transcriptional regulators
[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.00744372 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGAGCAAC TTCTGGCAGG TCTGAGAGCG GCGGGTGAAC CAACCCGCCT GCGTTTGCTC 
GCTCTGTTGG CGCGCGGGGA ACTGACCGTG ACCGAGCTCA CGCAGATCCT GCGTCAGAGC 
CAGCCGCGCG TCAGCCGCCA CCTGAAGCTT CTCTGCGAAG CCGCCTTGCT GGAGCGGTTC 
CGGGAGGGAA GCTGGGTTTT CTACCGCCTG GCGGGCTCGG GTCCGGTGGC TGAGCTGGCA 
GAAGTCCTGA GCGACCTGAT CCCGCAGGAA GACATTGTGA TCGCGAGGGA TATGGAGCGC 
CTCGAGGCGG TGCGCGCGGC GCGGGCCGAG AAGGCTGCAG CCTATTTCCG GGCCAATGCC 
GAGGAATGGA GCCGCATCCG GTCTCTTTAT GTCCCGGAGG ACAAGGTCGA GCAGACGATG 
CTGGAGTTCG GCGCGCGGGA CGATATCGGC CTTATCGCGG ATCTCGGTAC CGGCACCGGC 
CGGATGCTGG AACTGTTCGG GCCCAAGGCA AAAAGCGGCG TCGGGATTGA TCTGAGCCCG 
GAAATGCTTG CGCTGGCGCG GACGCAGCTT GCCCAGGCGC CGCTGCAAAA CTGTTCGATC 
CGTCAGGGCG ACCTCTACGA CCTGCCAATG CAGGACGAGA CGGCCGACCT GGTGACGCTG 
CACATGGTGC TGCACTACCT GGACGACCCG GCGGCTTCCA TCGCGGAAGC TGTGCGGATT 
TTGAAGCCGG GCGGACGCCT GCTGATCGCG GATTTCGCGC CGCATGAACT CGACTATCTG 
CGCGAGACGC ATGCGCATCG GCGGCTCGGG TTTGGCGAGG ACGAGGTCAA GGAATGGCTG 
GCGGATGCCG GCCTTCAAAT AAGAGAGACA AGGCATTTGC CGCCGGAAGG CGGCGAGGAC 
GCCAAACTTA CCGTCTCGAT CTGGGTTGCG GACAAGGCCG CCGGGCCGGC ACGCAAACCC 
GAAAAGGCGA TGGAATTCGA AGGAGCAAAA TAA
 
Protein sequence
MEQLLAGLRA AGEPTRLRLL ALLARGELTV TELTQILRQS QPRVSRHLKL LCEAALLERF 
REGSWVFYRL AGSGPVAELA EVLSDLIPQE DIVIARDMER LEAVRAARAE KAAAYFRANA 
EEWSRIRSLY VPEDKVEQTM LEFGARDDIG LIADLGTGTG RMLELFGPKA KSGVGIDLSP 
EMLALARTQL AQAPLQNCSI RQGDLYDLPM QDETADLVTL HMVLHYLDDP AASIAEAVRI 
LKPGGRLLIA DFAPHELDYL RETHAHRRLG FGEDEVKEWL ADAGLQIRET RHLPPEGGED 
AKLTVSIWVA DKAAGPARKP EKAMEFEGAK