| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2399 |
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| Symbol | |
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| ID | 5454367 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 2586264 |
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| End bp | 2587151 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640877974 |
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| Product | VacJ family lipoprotein |
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| Protein accession | YP_001413665 |
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| Protein GI | 154252841 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2853] Surface lipoprotein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.0106738 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGCAG AGGGCGCCCT GTCGGGGCAG CTATTCTTTT GGGGACGGGG CTACATGAAG
ATGAAGGACG GGTCCGGCAT GCCGAAAGCG ATGAGGAACA TGGCGCTTGC GATGGTGGCG
CTCATTGCGT TCGCCGCAGC GCCGCATGTC GCCATGGCCC AGGCCGAAGC GCCGGCGGCC
GTCGACAACG GCGTCGACGA GAACGATCCG CTGGAGCCGA TGAACCGCTA CTTCTTCGAG
CTCAACAAAT TCTTCGACAC CATTCTGCTG AAGCCGGTCG CCACCTGGTA TGACGGCGTC
GTGCCGGAAC CGGGCCGCGA CGGCGTCCGC AACTTCCTCG ACAATCTGCG CAGCCCCGTC
ATTCTCGCGA ACGACATGCT GCAAGGCGAG TGGGAGCGCG CGGGCACGAC GGCAAGCCGC
TTCGGCATCA ATACGACTGT CGGCGTACTC GGCCTGTTCG ATCCGGCATC GAGCTGGGGA
ATGCCGCAGC ACAGTGAAGA TTTCGGCCAG ACACTCGCTG TCTACGGTAC GGGCGAAGGC
GCCTATCTCT ATCTGCCGGT GCTCGGCCCT GCCCCGCCCC GCGACCTGAC GGGCTTCTTC
GTCGACCAGT TTTTCGACCC CTTGACCTAT ATCTATTGGG ACAAGCCGAA GACGGTGCCG
ACGATCCGCT TCGTCGTGAA CGGTATCGAT CAGCGCGCAC GCAGCCTGAA GACGCTCGAC
CAGATCGAAC GGACCTCTGT CGATCATTAC GCAACCATCC GCAATCTCTA TCGCCAGATC
CGCGCGAACG AGATCGCCAA CGGCCAGCGC GACTTCGACG ACTTGCCGGA TATCGACAAC
CTAAATTTCG ACACAAACGA AACAAACAAT CCCGGCATGC GTTTCTAG
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| Protein sequence | MLAEGALSGQ LFFWGRGYMK MKDGSGMPKA MRNMALAMVA LIAFAAAPHV AMAQAEAPAA
VDNGVDENDP LEPMNRYFFE LNKFFDTILL KPVATWYDGV VPEPGRDGVR NFLDNLRSPV
ILANDMLQGE WERAGTTASR FGINTTVGVL GLFDPASSWG MPQHSEDFGQ TLAVYGTGEG
AYLYLPVLGP APPRDLTGFF VDQFFDPLTY IYWDKPKTVP TIRFVVNGID QRARSLKTLD
QIERTSVDHY ATIRNLYRQI RANEIANGQR DFDDLPDIDN LNFDTNETNN PGMRF
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