| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2392 |
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| Symbol | |
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| ID | 5454850 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 2579601 |
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| End bp | 2581256 |
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| Gene Length | 1656 bp |
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| Protein Length | 551 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640877968 |
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| Product | putative ABC transporter ATP-binding protein |
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| Protein accession | YP_001413659 |
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| Protein GI | 154252835 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.935698 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 0.570925 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGCCT ATCAGTACGT CTATGTCATG GACCGCCTGT CGAAGACCTA TCCGGGCGGC
AAGCAGGTTC TGAAGGACAT CCGTCTTTCC TTCCTCCCCG GCGTCAAGAT CGGCGTTGTC
GGCCTCAACG GCGCGGGCAA GTCCACGCTG CTCCGCATCA TGGCGGGCGT CGACAAGGAT
CACACGGGCG AGGCCTGGGC GGCGGCGGGC GCGAAGGTCG GCTATCTCCA GCAGGAGCCG
GAGCTCGACC CGGCGCTCAA CGTCTTCGGC AACGTCATGG AAGGTGCGGC CGAGAAGAAG
GCGCTCATCG ACCGCTACAA CGAACTCGCC ATGAACTACT CGGACGAGAC GGCCGAGGAA
ATGGCGAAGC TGCAGGACAT CATCGACGCG CAGAACCTCT GGGATCTCGA CAGCCAGGTC
GAGATGGCGA TGGATGCACT GCGCTGCCCG GACCCGGAAG CGGATGTGAA CAATCTTTCG
GGCGGTGAAA AGCGCCGTGT CGCGCTCTGC CGCCTGTTGC TCGCCTCGCC CGATCTGCTG
CTCCTCGACG AACCGACCAA CCATCTCGAC GCGGAATCGA TCGCCTGGCT CCAGAACTAC
CTGAAGGAAT ATACAGGCAC CGTCGTCATG GTCACCCATG ACCGCTATTT CCTCGACAAT
GTGACGGGCT GGATTCTCGA ACTCGATCGC GGTTCGGGCA TTCCCTATGA AGGCAATTAT
TCCTCATGGC TCGAACAGAA GGAAAAGCGC CTCGAACAGG AAGGCCGCCA GGAGGAGGCG
AAGCAGCGCA CGCTGGCGCG CGAACTCGAA TGGATCAGGC AGAGCCCGAA GGCGCGCCAG
GCGAAATCCA AGGCCCGTAT CAGCGCCTAT GACGAGTTGC TGGCCGAGGC CGGCAAGCAG
CAGGAAGGCA GGGCCCAGAT CGTCATTCCG GCGGGCCCGC GCCTCGGCGG CAATGTCTAT
GAGGCCGAAA ACATCTCCAA GGGTTTCGGC GACAAGCTCC TGATCGACGA TCTCTCCTTC
AAGCTGCCGC CCGGCGGCAT TGTCGGCGTC ATCGGCCCGA ACGGCGCCGG CAAGACCACG
CTTTTCCGTA TGCTGACGGG TCAGGAAAAG CCCGACAGCG GCAAGCTCAC GATCGGTGAG
ACCGTCGTCA TGGGTTATGT CGACCAGAGC CGCGACTCGC TCGACAGCAA CAAGACCGTC
TGGGAGGAAA TCTCCGGCGG CACCGACATC GTCGAACTCG GCAAGATCAC CATGCCGAGC
CGCGCCTATG TGGGCTCGTT CAACTTCAAG GGTTCGGACC AGCAGAAGAA GGTGGGCCTT
CTCTCAGGCG GCGAGCGCAA CCGCGTTCAC CTCGCCAAGA TGCTGAAGTC CGGCGCGAAC
CTCCTTCTCC TCGACGAACC GACCAACGAC CTCGACGTCG AAACGCTGCG CGCGCTCGAA
GACGCGCTCG TCGCCTTCGC CGGCTGCGCC GTGGTCATCT CGCATGATCG CTGGTTCCTC
GACCGCATCG CCACGCACAT GCTCGCCTTC GAGGGCGACA GCCATGTCGA ATGGTTCGAG
GGCAACTACC AGGATTACGA GGAAGACAAG AAGCGCCGCA TGGGCCCCGC CGCCGAAATT
CCGACGCGGA TCAAGTACAA GCGTTTCAGC CGGTAA
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| Protein sequence | MAAYQYVYVM DRLSKTYPGG KQVLKDIRLS FLPGVKIGVV GLNGAGKSTL LRIMAGVDKD
HTGEAWAAAG AKVGYLQQEP ELDPALNVFG NVMEGAAEKK ALIDRYNELA MNYSDETAEE
MAKLQDIIDA QNLWDLDSQV EMAMDALRCP DPEADVNNLS GGEKRRVALC RLLLASPDLL
LLDEPTNHLD AESIAWLQNY LKEYTGTVVM VTHDRYFLDN VTGWILELDR GSGIPYEGNY
SSWLEQKEKR LEQEGRQEEA KQRTLARELE WIRQSPKARQ AKSKARISAY DELLAEAGKQ
QEGRAQIVIP AGPRLGGNVY EAENISKGFG DKLLIDDLSF KLPPGGIVGV IGPNGAGKTT
LFRMLTGQEK PDSGKLTIGE TVVMGYVDQS RDSLDSNKTV WEEISGGTDI VELGKITMPS
RAYVGSFNFK GSDQQKKVGL LSGGERNRVH LAKMLKSGAN LLLLDEPTND LDVETLRALE
DALVAFAGCA VVISHDRWFL DRIATHMLAF EGDSHVEWFE GNYQDYEEDK KRRMGPAAEI
PTRIKYKRFS R
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