| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2388 |
|---|
| Symbol | |
|---|
| ID | 5455057 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | + |
|---|
| Start bp | 2577477 |
|---|
| End bp | 2577965 |
|---|
| Gene Length | 489 bp |
|---|
| Protein Length | 162 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640877964 |
|---|
| Product | activator of Hsp90 ATPase 1 family protein |
|---|
| Protein accession | YP_001413655 |
|---|
| Protein GI | 154252831 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3832] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 0.312436 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 52 |
|---|
| Fosmid unclonability p-value | 0.420624 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCAGGC CCGATATAGA CCCGAAGCTC GACCTCGTGC TCGAACGCAC CGTCGATGTG
CCGCCGCGCC TCGTCTGGCG CGCCTGGACG GAGCCGGAGC ATCTCATGCC GTGGTTCTGC
CCGCGCCCCT GGGCGACGGT CGAATGCCGG ATCGACCTGC GGCCCGGCGG CGAGTTCTAC
ACCCAGATGC GTTCGCCCGA AGGCAAGGAC ATGGAGGGCG GCTCCGGCTG CTATCTCGAA
ATCGAGAAGG AGCGGAAGCT CGTCTGGACC TCGGCGCTAG GCCCCGGCTA CCGGCCGGCC
GTGGCGCGGG TGCACGATCT TTTCTTCACC GCCTGGATTC TCATGGAGCC GCAGGGGCAG
GGCACGAAAT ACACCGCCAT CGCCAAGCAC CCGGACGAGG CCTCGGCGAA GCGTCACGAG
GAAATGGGTT TCCATGAAGG CTGGAACACC GTTGTGGACC AGCTTGCCGA ATACATGAAG
ACGATCTAG
|
|---|
| Protein sequence | MTRPDIDPKL DLVLERTVDV PPRLVWRAWT EPEHLMPWFC PRPWATVECR IDLRPGGEFY
TQMRSPEGKD MEGGSGCYLE IEKERKLVWT SALGPGYRPA VARVHDLFFT AWILMEPQGQ
GTKYTAIAKH PDEASAKRHE EMGFHEGWNT VVDQLAEYMK TI
|
|---|
| |