| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2384 |
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| Symbol | |
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| ID | 5456480 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 2573606 |
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| End bp | 2575255 |
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| Gene Length | 1650 bp |
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| Protein Length | 549 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640877960 |
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| Product | protein of unknown function DUF894 DitE |
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| Protein accession | YP_001413651 |
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| Protein GI | 154252827 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.123744 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 0.932575 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGGACG CGGCAAAAGC GGAAAAAGAT GCGGTCTCCG CCTGGGCGCC CTTCGGGCAC
GCCGCCTTTG CCGTTCTCTG GACAGCGACG GTCGTTTCCA ACATCGGCAC CTGGATGCAC
GACGTCGCCT CCGGCTGGCT GATGACCTCG CTTTCGCCGT CGCCCTTGAT GGTGGCGCTG
GTGCAGGCGG CGACCACGGC GCCGATTTTC CTCTTCGCGC TTTCCGCCGG CGCGATGGCC
GATCTCGTGG ACCGGCGTCG CTTGCTCATC GTGATCATGA CCGCGCTCGT CATCGTCACG
CTGGGCCTCG GCGTGCTGGT GCTACTTGGC CTCGTCAATG CATGGATGCT GCTGCTTTTC
ACCTTCCTGT CCGGGGCAGG GGCTGCCTTT GTTGCACCGG CATGGCAGGC GATCGTCCCT
CAACTCGTTC CAAGACCCGA TCTTTCGTCG GCGGTGGCGC TCAACAGCGT CGGGATCAAC
ATAAGCCGCG CCATAGGTCC GGCGCTTGCT GGCCTCATCA TTGCCTCTTT CGGTATCGCA
TGGCCCTATA TGCTCAACGC CCTGAGCTAT GTGATCGTCA TCGGCGCACT TCTGTGGTGG
CGACCGCCGC CGCAGCCGAA AAGCGACCTG CCTGTCGAAC GCTTCTGGAG CGCCATCCGC
TCGGGTCTGC GCTATGTCCG CGCGAGCAGC CCCATGCGCG CCACGCTGGT TCGCGCTATA
GCCTTCTTCC TCTTCGCCAG TGCCTATTGG GCGCTGCTTC CCATTATCGC CCGCCGGGAA
TTGCAGGGGG GGCCAGAGCT TTACGGTCTC ATGCTCGCTT CCGTCGGCAT CGGGGCCGTC
AGCGGCGCGC TCTTTCTGCC GCGCCTGAAG AAGAGCATGG GGCCGGATAC TCTCGTCGCC
GCCGGAACCG CGGGAACGGC GCTTGTTCTC GCCGTCTTCG CTCTCGTCGC CATTCCGGCA
GCCGCGATCG CCGTCAGCTT CATCGCGGGC GCTTCATGGA TCATGGTGCT CTCCAGCCTC
AATGTATCGG CGCAGATGGT CCTGCCGGAT TGGGTTCGCG CTCGCGGCCT TTCGGTCTTC
ATCACCGTTT TTTTCGGCTC TATGACTCTG GGAAGCATGA TCTGGGGACA GACCGCCTCG
CTGCTCGGCG TTCCGTTCAC ATTGCTTTTG GCCGCCGCCG GTTCGCTGCT GGGCGCGGTT
CTCTCCTGGC CCTTCAAGCT GCGGCAGGGC GATGCGCTCG ATCTTTCGCC CTCCATGCAT
TGGCCCGCAC CGGTTGTGGC GGGCGATGTA GCGCATGATC GCGGGCCCGT GATGATCACC
GTCGAATATC GGATCGCACC GGCAACCGCC GCTGATTTTG CCGCCGCCAT GAAGGATCTC
CGTGCCGCGC GCCGCCGCGA CGGGGCTTAT GCCTGGGGTC TTTTCGAAGA TGTCGCCATG
CCGGGCCGCT ATATCGAATA TTTCACCGAG GAATCATGGC TCGCCCATCT GCGCCATCAT
GAGCGTGTGG CGGAGTCCGA TCGCCTTCTC CAGCAGAAAG TCCGCGCCTT CCATCTGGGT
CCGGACGATC CCGTAGTCAC TCATTATCTC GCGCCGGCGC CGGGCGCCGC TGTGGTGCCT
CCACCGCCGC GTGACGGAGA GTTGCAATGA
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| Protein sequence | MTDAAKAEKD AVSAWAPFGH AAFAVLWTAT VVSNIGTWMH DVASGWLMTS LSPSPLMVAL
VQAATTAPIF LFALSAGAMA DLVDRRRLLI VIMTALVIVT LGLGVLVLLG LVNAWMLLLF
TFLSGAGAAF VAPAWQAIVP QLVPRPDLSS AVALNSVGIN ISRAIGPALA GLIIASFGIA
WPYMLNALSY VIVIGALLWW RPPPQPKSDL PVERFWSAIR SGLRYVRASS PMRATLVRAI
AFFLFASAYW ALLPIIARRE LQGGPELYGL MLASVGIGAV SGALFLPRLK KSMGPDTLVA
AGTAGTALVL AVFALVAIPA AAIAVSFIAG ASWIMVLSSL NVSAQMVLPD WVRARGLSVF
ITVFFGSMTL GSMIWGQTAS LLGVPFTLLL AAAGSLLGAV LSWPFKLRQG DALDLSPSMH
WPAPVVAGDV AHDRGPVMIT VEYRIAPATA ADFAAAMKDL RAARRRDGAY AWGLFEDVAM
PGRYIEYFTE ESWLAHLRHH ERVAESDRLL QQKVRAFHLG PDDPVVTHYL APAPGAAVVP
PPPRDGELQ
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