| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2383 |
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| Symbol | |
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| ID | 5455840 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 2571623 |
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| End bp | 2573590 |
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| Gene Length | 1968 bp |
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| Protein Length | 655 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640877959 |
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| Product | amidohydrolase 3 |
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| Protein accession | YP_001413650 |
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| Protein GI | 154252826 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1574] Predicted metal-dependent hydrolase with the TIM-barrel fold |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.426658 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCGCA CGCCGACGCG CCGCGACACG GTAAAGGGGA TGGCGGCAGC CGCCCTCGTG
ACGGCGGCCG GTATGGGCCG CGCCTGGGGA AGCGAAACGA GCGGACAGCA AATGGTAGAC
GTCATCCTGA AAAACGGGCG CATCACGACG CTCGACCGCA AGAAGCCGGA GGCGCAGGCG
ATTGCCGTAA AAGACGGCCT CGTCATGGCG ACCGGGCGTG ACGAAGAAGT CATGCGCCTT
GCAGGATCGA ATACCAAGAT TGTCGATCTC GGCGGCAGGC GCGTCATCCC CGGCCTCAAC
GACAGCCATA CGCATCTGAT CCGCGGCGGG CTGAACTACA ATATGGAACT GCGGTGGGAG
GGCGTTCCTT CCGTCGCGGA TGCACTTCGC ATGCTGAAGG AACAGGCAGA CCGAACGCCT
GTCCCGCAAT GGGTGCGCGT CGTCGGCGGC TGGTCCGAGT TTCAGTTTGC GGAAAGGCGC
ATGCCGACGC TGGACGAGAT CAACGCCGCC GCGCCCGCAA CGCCCGTTTT CATCCTGCAT
CTCTATGGAC GCGCTCTGCT GAACAAGGCT GCCCTCGATG TTCTCGGCAT CACCAAGGAC
ACGCCAAATC CGCCGGGCGG CCTGATCGAG AAAAATGCGA GAGGCGAGCC GACCGGCATG
CTGGTCGCAA AGCCCTCCGC TCTCATTCTC TATTCGACGC TGGCGCGCGG CCCGAAACTG
CCGGTGGAGG ACCAGGTGAA TTCGACGCGC CACTATATGC GCGAGATGAA CCGGCTTGGC
ATCACCAGTG TCATCGACGC AGGCGGTGGC GGGCAGAACT ATCCTGAAGA TTACGATGTC
ATCCGCCGTC TGCACGAGGA CGGCAACCTC ACCTTGCGCA TCGCCTATAA TCTCTTCGCG
CAGAAGGCGG GGAGCGAGCT ATCCGACTAT GAGCGTTGGC TTGAAATGAC AGAGCCGGGC
GCTGGCGATG CATTCCTGCG CATGAACGGC GCCGGCGAAA ACATCGTCTG GTCGGCCGCC
GACTTCGAGA ATTTTCTGGA GCCGCGCCCC GAGCTCGCGC CCATCATGGA AAGCGAACTC
GAGCCGGTGG TGGAACTGCT GGCCGCGAAC AAGTGGCCTT TCCGCATTCA CGCAACCTAT
GACGAGTCGA TCTCGCGGTT CCTTTCGGTT TTTGAACGTG TGAACGGCAA AATTCCTTTC
CAGACCCGCT TCATCATCGA TCACGCGGAG ACGGTGAGCG AAGGCAACAT GGAGCGTATT
GCGGCGCTGG GCGGCGGCAT CGCCACCCAG CATCGTATGG CCTTTCAGGG CGAATATTTC
GTCGATCGCT TCGGCGCGGA AGCGGCAAAG CAGACGCCCC CAATCGCGAA GATGCTGCAG
GCGGGCCTGC CCGTCGGCGG CGGCACGGAT GCGACGCGTG TTGCCTCCTA CGATCCCTGG
GTTGCGCTCT ACTGGCTGAC CACGGGCAAG ACGCTGGGCG GTCTGTCGCT CTATGACGAG
GACAATGTGC TCGACCGGGA AACGGCGTTG CGTATCTGGA CGCAAGGGTC GGCGTGGTTT
TCCGGAGAGG CGGAGGTCAA GGGTACGCTG GAACCGGGAC GTTATGCCGA CCTGGCCGTT
CTCTCGGCCG ACTATATGAG CGTGCCGCCT GAAGCCATCC GGCGCATCAA CGCCGTCCTC
ACCATGGTCG GCGGGCGCAT CGTTTACGGC GAAGGCGACT TCGCTTCGCT GTCGCCGCCA
ATGCCGCCCG CGTCTCCGGC ATGGAGCCCC GCGGCACTGA TCCCAAGCCC CGCCATGCGC
GCGGAGAGCT CCGGCACCAG CCAGTTCGCA CGGGCCTGTC ACGATGCCTG CGCCTCGGGC
TGCGGCATTC ATGGGCACGC ACACGGGATT GCATGGGAAG CGCCATTGCC GGTCGCCGAC
AAGACGGCTT TCTGGGGTGC GCTTGGCTGC TCCTGTTTTG CTGTCTGA
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| Protein sequence | MSRTPTRRDT VKGMAAAALV TAAGMGRAWG SETSGQQMVD VILKNGRITT LDRKKPEAQA
IAVKDGLVMA TGRDEEVMRL AGSNTKIVDL GGRRVIPGLN DSHTHLIRGG LNYNMELRWE
GVPSVADALR MLKEQADRTP VPQWVRVVGG WSEFQFAERR MPTLDEINAA APATPVFILH
LYGRALLNKA ALDVLGITKD TPNPPGGLIE KNARGEPTGM LVAKPSALIL YSTLARGPKL
PVEDQVNSTR HYMREMNRLG ITSVIDAGGG GQNYPEDYDV IRRLHEDGNL TLRIAYNLFA
QKAGSELSDY ERWLEMTEPG AGDAFLRMNG AGENIVWSAA DFENFLEPRP ELAPIMESEL
EPVVELLAAN KWPFRIHATY DESISRFLSV FERVNGKIPF QTRFIIDHAE TVSEGNMERI
AALGGGIATQ HRMAFQGEYF VDRFGAEAAK QTPPIAKMLQ AGLPVGGGTD ATRVASYDPW
VALYWLTTGK TLGGLSLYDE DNVLDRETAL RIWTQGSAWF SGEAEVKGTL EPGRYADLAV
LSADYMSVPP EAIRRINAVL TMVGGRIVYG EGDFASLSPP MPPASPAWSP AALIPSPAMR
AESSGTSQFA RACHDACASG CGIHGHAHGI AWEAPLPVAD KTAFWGALGC SCFAV
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