Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_2379 |
Symbol | |
ID | 5456926 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 2568110 |
End bp | 2569726 |
Gene Length | 1617 bp |
Protein Length | 538 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640877955 |
Product | integral membrane sensor signal transduction histidine kinase |
Protein accession | YP_001413646 |
Protein GI | 154252822 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 57 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGAAA TTGCGCATGA AAAGGAACAA ACGTTCCTGA TAACCACCGC ACGGCCGACC CGTCGTCAGG TGCAGCTGGC GGTGTGGATG CTTGCCAGTC TGGTCGTCGC GCTCCTCATC ACCATGCCTT TCGCACGCAC GCCCCTCGAG AACACCGAAA TTTTCCTGCC TGCCTATGCC TCGGCCATTC TCGTCAATGA GCTGTTCACG GCGGCGCTGC TTGTTGCGAT TTATGCGGTA CAGCGGTCCG CCGCCATTCT CGTTCTCGCG GCAGGTTATC TGTTCACAGG GCTTCTCGTC GTGCCCTGGG CGATGTCCTT TCCCGGCGTT TTCAACGCGC TGGGTTTTGA TATGGGGCTG CAGAGCACAG CGATGATCGC CGTCATGAGG CGGATCGGCT TTCCGCTTTG CGTCATTGCC TATGTGTTGC TGAAGGACGA GGACGCAGCA GGAAAGCTGG AAACGGGTCC GGTCCAGATG CGGATCGTCG GGATGGTGTT CGGCGTCACC GCCTTTGTCG GTGTTGCAAC CTGGCTCATC GTGCTTGGAG ATGACCTGCT GCCGGGCTTC ATGGAGGATA CGCGCAATGT CACACCACTG TGGAGCTATG TGCCCGCAGT ATCGGTGACA CTCTATGTGA CGGGCATTGT GCTGCTCTGG AGGCAGCGGC GCTCTGTGCT CGATCTGTGG CTGATGGTGG TGCTGGCGAC ACTCTGTATC GAGATTGTGC TGCTTTCCTA TGTGAGCGGC GGCATCCGCC TCAGCATTGG CTGGTGGGCC GGCAGGATTT GCGGGCTCAT CTCCGCCAGT ATGGTGCTCG TGGTGTTGTT GTCGGAAACC GCGATGCTCT ACGGGCGGCT CGCCCGCGCG CTTGCACAGG AACGGCGAAT CCGCGATGCG CGGCTGTCGG AAATGGAAGC CCTGTCGGCC TCGATCGCGC ATGAGGTAAA CCAGCCTGTC GCCAGCATGG CGACCAATGC CAATGCGGGG CTGCGTTGGC TTGAGCGGGA ATATCCGGAG GCGCATGAGA CAAAGGCAGC ACTGACGCGG ATCGTTCGGG ATGGCCATCG CGCGGGGGAC ATAATCCGTG GTGTGCGCAG CATGTTCAAC AGGGATTCGC AGGTTCGGGT CCCGACTTCC ATCAACGACT TGATTGCTGA AGTCGTGGAG CGGCACAGAG CGGAGATGCG GCAGAGCCAT GTAGCTCTCG ACCTGCAATT CAAGGCGGAT ATGCCGGTCG TCACCGTCAA CCGCATCCAG ATAGAGCAGG CTGTCGCAAA TCTCGTCACG AACGCCATCG ACGCGATGCG GAGCATATCG GAACGGGAAC GTCGCTTGAG TATCGTCACC GGCCTCGGAG ACGAATTCAC CGTGCTGGTT TCAGTGGCAG ATCGCGGTGC AGGCGTTACG CCGGCTCATG CAGGGGAGAT ATTCAAGCCG TTCTACACGA CCAAGCCGGA TGGAATGGGA ATGGGATTGA TGTTCTGCCG CTCGGCTGTA GAGAGCCACG GGGGAAATCT CTGGGTTGAA CAAAACAAAC CGTGCGGCGC GGTATTCAGA TTCACACTGC CATGTAGTAT AGAGGTGGCT CCGCAATATT TAAGAGACGC AGGATGA
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Protein sequence | MAEIAHEKEQ TFLITTARPT RRQVQLAVWM LASLVVALLI TMPFARTPLE NTEIFLPAYA SAILVNELFT AALLVAIYAV QRSAAILVLA AGYLFTGLLV VPWAMSFPGV FNALGFDMGL QSTAMIAVMR RIGFPLCVIA YVLLKDEDAA GKLETGPVQM RIVGMVFGVT AFVGVATWLI VLGDDLLPGF MEDTRNVTPL WSYVPAVSVT LYVTGIVLLW RQRRSVLDLW LMVVLATLCI EIVLLSYVSG GIRLSIGWWA GRICGLISAS MVLVVLLSET AMLYGRLARA LAQERRIRDA RLSEMEALSA SIAHEVNQPV ASMATNANAG LRWLEREYPE AHETKAALTR IVRDGHRAGD IIRGVRSMFN RDSQVRVPTS INDLIAEVVE RHRAEMRQSH VALDLQFKAD MPVVTVNRIQ IEQAVANLVT NAIDAMRSIS ERERRLSIVT GLGDEFTVLV SVADRGAGVT PAHAGEIFKP FYTTKPDGMG MGLMFCRSAV ESHGGNLWVE QNKPCGAVFR FTLPCSIEVA PQYLRDAG
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