| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2374 |
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| Symbol | |
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| ID | 5456445 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 2561635 |
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| End bp | 2562288 |
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| Gene Length | 654 bp |
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| Protein Length | 217 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640877950 |
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| Product | isochorismatase hydrolase |
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| Protein accession | YP_001413641 |
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| Protein GI | 154252817 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1335] Amidases related to nicotinamidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.0229134 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 0.494779 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACTTTTC GCAACGGTCT GGATTCGCTT CTTCGTCCCG AAGACTCGGT CCTCGTGCTG
ATCGACCATC AGCCCTATCA GCTCGCAAAC CTGAACAGCC ATGATCCGCA TATGGTGGTC
AACAATTCTG CAGGGCTGGC GAAGGCCGCA AAGGTCTTTG GCGTTCCCAC CATCCTGACG
AGCGTGGTCG CGGATCGCGG CGGTCATATC TTTCCGCAGA TCACCCAAGT GTTCCCCGAT
CAGGAAGTGA TCGACCGCAC CTTCATCAAC ACCTGGGAAG ATCCGAACGT GGTGGATGTG
GTCAAGGCGA CCGGTCGCAA GCAGCTGATC ATCGCAGGTC TTTGGACCGA AGTCTGTGTC
GCCATGCCGG CGATACAGGC TGCCGGCGAA GGCTGGGATG TGACAGTGGT CACGGATGCA
TCGGGCGCCG TTTCGGTGGA GGCACACGAG ATCGCCATCC AGCGCATGAT CGCAGCCGGG
GTCAACATGA TTACGTGGAT GGCGCTGGCC GCGGAATGGC AGCGCGACTG GGCACGGGCC
GAAACCGCCT TCGCGCTGAA TGATGTTGTC ATTCAGCATG GCGCGGGTAG CGGCATTGCC
TTCCTCTGGG AGCAGCAGCT TCTCAACACG CCGCTTTCAC GCGCCGCAGA CTGA
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| Protein sequence | MTFRNGLDSL LRPEDSVLVL IDHQPYQLAN LNSHDPHMVV NNSAGLAKAA KVFGVPTILT
SVVADRGGHI FPQITQVFPD QEVIDRTFIN TWEDPNVVDV VKATGRKQLI IAGLWTEVCV
AMPAIQAAGE GWDVTVVTDA SGAVSVEAHE IAIQRMIAAG VNMITWMALA AEWQRDWARA
ETAFALNDVV IQHGAGSGIA FLWEQQLLNT PLSRAAD
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