| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2363 |
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| Symbol | |
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| ID | 5456316 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 2551078 |
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| End bp | 2552064 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640877941 |
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| Product | alpha/beta hydrolase fold |
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| Protein accession | YP_001413632 |
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| Protein GI | 154252808 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 0.329927 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAAACCG ATCCTCCCTT AAGTCCTACC GCATCCCGCC GCGACGTCAT GTTGGGCGCC
GCATCCGCTG CCATAGCCGC GGGACTATCT GCTGCTGCCT TGGCTCAAAC AACATCGGCA
AAGGCAATCT CCTTCTCAAC TCCAACCAAC GGAAAGCAGA TCATGAATAC AATCACCACA
AAGGACGGCA TCGAAATCTT CTACAAGGAC TGGGGTTCGG GACAGCCGAT CGTATTTCAC
CACGGTTGGC CGCTGAGTTC CGACGACTGG GACGCACAGA TGCTCTATTT CGTCAAGCGG
GGTTATCGCG TCATCGCTCA TGACCGGCGC GGCCACGGCC GTTCGAGCCA GGTCGGCGAC
GGCCACGACA TGGATCATTA TGCGGCCGAT GCGGCGGCCG TTGTCGAGCA TCTCGACCTT
CGCAACGCAA TTCACATCGG TCATTCCACC GGCGGCGGCG AAGCCGCGCG CTACGTCGCT
CGCCACGGAC GGGGACGCGT CGCCAAGCTG GTTCTCATCG GGGCAGTGCC GCCGATCATG
GTGAAGACGT CCGCGAATCC GGGTGGTCTG CCGATCGAGG TGTTTGATGG CTTGCGTGAG
CAGCTTGCCG CCAACCGCGC CCAATTCTAT CTCGATTTCG CAAGCGGGCC TTTCTACGGC
TTCAACCGGC CGGGCGCAAA GGCGTCACAG GGCATTATCG AGAACTGGTG GCGTCAGGGC
ATGATGGGCG GCGTCAAGGC GCACTACGAC GGGATCAAGG CCTTTTCCGA GACCGATTTC
ACGGAGGACC TCAAGGCAAT CGATGTGCCT GTTCTCGTCA TGCACGGAGA TGACGATCAA
ATCGTGCCAA TCGCCGACTC CGCACCGCTC TCGGCAAAGC TGCTGAAAAA GGCTGAGCTC
AAGGTGTATG AAAAGCTCCC CCATGGCATG TGCACGACCC ACGCCGACCT GATCAATTCC
GACCTTCTCG ACTTCATCAA GGCGTAA
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| Protein sequence | METDPPLSPT ASRRDVMLGA ASAAIAAGLS AAALAQTTSA KAISFSTPTN GKQIMNTITT
KDGIEIFYKD WGSGQPIVFH HGWPLSSDDW DAQMLYFVKR GYRVIAHDRR GHGRSSQVGD
GHDMDHYAAD AAAVVEHLDL RNAIHIGHST GGGEAARYVA RHGRGRVAKL VLIGAVPPIM
VKTSANPGGL PIEVFDGLRE QLAANRAQFY LDFASGPFYG FNRPGAKASQ GIIENWWRQG
MMGGVKAHYD GIKAFSETDF TEDLKAIDVP VLVMHGDDDQ IVPIADSAPL SAKLLKKAEL
KVYEKLPHGM CTTHADLINS DLLDFIKA
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