| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2360 |
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| Symbol | |
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| ID | 5454834 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 2547483 |
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| End bp | 2548517 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640877938 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_001413629 |
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| Protein GI | 154252805 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGACACA GAATGAAGGA GCAGCTTCTC GGGGTCTCCG TCACGGCTGG CTTGCTCATC
ATCCTGTCGT TCGGGTGGCT CTACGCAGGG CGCTTCGAGG AAGAGACCGA CAACGCCTAT
CTGCGGGCCG ATATCACATC CATCGCGCCA AAGGTGTCCG GATACGTCGT CGGTGTCGAC
GTCGCCGACA ACGAAACCGT CGAGGCGGGC GACATTCTCT TCCGCATCGA CGACAAAGAC
TACCGGACAC GCCTGGCACG GGCAGAGGCA GATGTCGCTT CCGCTCATGC GTCCCTCCTG
AACATGGAAG CCGAGAGAGA TCTTCAGGAA TCGACGATCG CCCAGAGCGA GGCTCAACTC
GACGCCGCGC GGGCCTCGCA AAAATTCTTC GCCCGCGAAT TCGAACGATA TCGTTCGCTG
GTTCGGACGA ATGTCGTCAG CCGGGCTCAG CTGGAGCAAA GAGAGGCTGC CAGCACGCAG
GCAGATGCCG CCGTTGGGGC GGCGAGAGCC GCTGTCGAGG TGCAACGCAA GAAGTTGAAT
GTTCTCGCCG CCCAAAGAGA AGCTGCGGAA GCGGCGCTTT CGCAAGCCGA AGCCTCTCGG
GCTCTGGCTC AGATCGACCT CGATAATACG ATTGTAAAAG CTCCCGTCAG CGGCGTTGTC
GGCAATCGTC AAGTGCGGGT TGGCCGGCTT GTGACTGCGG GAATGCCGCT GCTCGATCTC
GTGCCAATCC CCCACATCTG GGTTGTCGCC AATTTCAAGG AGAGCCAACT GGAGCATGTT
CGGGTCGGTC AGCCAGTGCG CGTCACGGTC GATGCCTATC CACACGCAGA AGTCCGAGGC
GTCGTCGACA GTCTTTCGCC GGGAAGCGGT GCCGCATTCA GCCTGATTCC TCCCGATAGC
GCGACGGGTA ACTTCGTCCG CGTTGTGCAG CGCGTGCCCG TCAATATCAG GTTGACGAGT
GTTGTCCCGC AGCTACGCCT GGTTCCCGGC TTGTCCGCAC GTGTGACGAT CGATACCGCC
GGAGTGGAGG AATAG
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| Protein sequence | MRHRMKEQLL GVSVTAGLLI ILSFGWLYAG RFEEETDNAY LRADITSIAP KVSGYVVGVD
VADNETVEAG DILFRIDDKD YRTRLARAEA DVASAHASLL NMEAERDLQE STIAQSEAQL
DAARASQKFF AREFERYRSL VRTNVVSRAQ LEQREAASTQ ADAAVGAARA AVEVQRKKLN
VLAAQREAAE AALSQAEASR ALAQIDLDNT IVKAPVSGVV GNRQVRVGRL VTAGMPLLDL
VPIPHIWVVA NFKESQLEHV RVGQPVRVTV DAYPHAEVRG VVDSLSPGSG AAFSLIPPDS
ATGNFVRVVQ RVPVNIRLTS VVPQLRLVPG LSARVTIDTA GVEE
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