| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2355 |
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| Symbol | |
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| ID | 5455766 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 2541164 |
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| End bp | 2543872 |
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| Gene Length | 2709 bp |
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| Protein Length | 902 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640877933 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_001413624 |
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| Protein GI | 154252800 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.415333 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 0.408426 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACAG CGTCCAACTC GATTGGCGAA ACCGATCCTG AATCAATGCG TGCGCTGCAA
ATCATCGAAA GCATGCCAGG CTTTGCATGG TCGGCGGACA GCGCCGGGCA GTTCACCTAT
GTCAGTCCGA AAGCGTTGGT CTTTCTCGGC AATACCAGCG CCGATCTCAA TACGGCCGAT
GAAGAGGACG AATTCGGATG GCGCACGGTC GTCCATCCGG ATGACTACGA TCGAGTCGCG
GCACGGTGGC GCCACTGTCT TCGTACAGGC GAGCACTATG ACACCGAGCA TCGACTGCGG
CGTACGGACG GAGTGTATCG CTGGTTCCGC AATTCGGGCC GCCCTTCACG CGATAGCGAG
GGGCGTATCA CCCAATGGTA CGGCACGACT ATAGATATCG AGGACCAGAA GCAGGCCGAG
GCCACATTAC GCGACCGAGA ACAGGAGCTG TCGCAGCTTG TGGATATGGT TCCCAGCCAT
CTTTGGCGGC TCACGGCGGA TGGCGAGCCG ATCTTCTTCA ACAGGCGCAT GATCGAGTTT
ATCGGCATGG ACGTGGGGGA TCTCGGCAAT TCGCGACGGA ACCGGATGGA GGATCTGATC
GACTCCTTCG TCCATCCGGA TGACGCCCAT GCGATGAAGC AAGCGCTCGC CCAAAGTCTC
ACCACAGGTC AGCATTTTGT CATGCGGTAT CGTCTACGCA GGACCGACGG TGTTTATCAC
TGGATGTCGA GCCGCGCCGA ACCGCTACGG GATCACGTCG GCCGGATCGT TCAATGGTAC
GGCCTCTGTC ACGACATAGA CGACCAGGTG AAGGCCGAGG AGGCAGTGCG GGAAAGCGAG
CAGCAGCTTC AGGGGATCAT CGACGCCGTA CCGGTTCATA TCTGGAGTTG GACACCGTCA
GGCGATTTGG CCTACGTCAG CAAGCGCTAT CTGGCACATC TAGGTCTCTC AGAAGCAAAC
TTCGAAGACT TCACGCGAGT GGCACAGGAA TTGGTCCATC CGGACGATGC TCCCGGGGTT
CAGGCCACTG CGGCGGCCTC TCTTGCGAGC GGCGACGCTT TCGCCATGAG ATACCGACGG
CTCTCCAAGG ACGGTGCCTA TCGCTGGATG GAAGGCAGGT GCGAGCCTCT GCACAACCGC
GATGGAACGA TCCTGCACTG GTACGGCGTC TCCATCGACA TCGACGATCA AGTAAGGGCG
GAGGAAGCTC TCAGAGCCAG CAAGCGGCAG CTGGAGCAGA TGATCGATGC CCTGCCTGTC
AATATTCTGA GCTTCTCCCC TTCGGGCGAG ATGACCTATG CCAGCAAGCG CTATCTGGAG
AGAGTCGGCA TACCACCGCA TATCAGGAAT TTCGACACGC TGGCTCGGGA CGTAGCTCAT
CCTGAAGACT TTCCTGTGAT GTTCCGCAGG GCGACGGATG GCTTCGCAGC AGGCACGCCT
TTCGTTAGCC GGTTTCGACG GCGCGAAAAA GATGGCGTCT ATCGCTGGAT AGAAGCACGC
GCGCACCCGT TACGCGATAC CGACGACACG ATCGTGCAAT GGTACATCGC TGCTATCGAC
ATCGAAGAGG AGATGCATGC GCAACAGGCA TTGCGAGAGA GCGAGCGCAC GCTACGCCAA
CTCATCGAAA CGTTGCCTGC GCTTATCTAC TGCGCCGCAC CGGACGGCAA GCCGACCTAT
CGCAGTCAGC AGCTCACCGA ATTTCTGGGA TTCGGCCTCG ATGACAAGGA CGAAACGGGA
GTATCGCGTC TGGTGAGCAC GCTCGACGCC ATCATCCATC CCGATGACCT TGCGCTCGTC
CATGAAAAGT ATGGCCATTC GCTGGCTACC GGGAAGCCGT ATGCGCTCAG GCACCGGCTA
CGGCGCTTCG ATGGCGTCTA TCGCTGGGTC GAGACACGCG CCGCACCAAT GTGCAATGAC
GAAGGTGAGA TTGTGCAGTG GAACGGTGTC TGCATAGACA TCGATAGCGA GGTGAGGACG
CAGGAAGAAC TTCGTTTGGC GCAGGACAGA CTTGCACGAG CCAGTCATGC GGCCGGGCTG
GCCGAACTTT CGGCCTCGAT TGCGCATGAG GTGAACCAGC CTTTGGCAGC AATCGTCGCC
AACTCTCATG CCTGTCACCA TTGGCTCTCG GCGGAGCCGG CGAACATGGA GCGTGCGAAG
ATCACGGTAG AGCGCATTAT CCGGGACGCG AACGGTGCCG CCGACATCGT GAGCCGTATT
CGCGCCTTGT TCAAACAATC AACGGAGACG AGGGTAGTCA CGCCGCTGAG TAGCGTCATC
ACCGAGATAC GCGAGCTTCT GACGGATGAA GTGACCCGGA GACGCGTGCA CATGGAGGTC
GACATAGCTG ATGGCCTTCC ACCGATCGCC CTCGACCGGG TCCAGATTCA ACAGGTTCTG
ATAAATCTCA TCCGAAACGG GATGGAGGCT ATGGGCTCTG TACCTGGCAG GAGAGAGCTT
CGTCTCCGTG TGCGCTTTAT CGAAGATGCC ATTCGGGTTG AGCTCAGTGA CAGCGGTCCA
GGAATTGAAC TGTCCGAAAA GATATTCGAG CCCTTCTTCA CGACGAAGGA GCGCGGAATG
GGCATGGGGC TCGCCATCTG CCGCTCGATT GTAGAGTCCC ATGGCGGCCG GCTCTGGGCA
GAGAACAACA CCCCGCACGG CGCGACGTTT GTTTTTGCGC TGCCAGTTGA AGCAACGGCG
GCGGCATGA
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| Protein sequence | MTTASNSIGE TDPESMRALQ IIESMPGFAW SADSAGQFTY VSPKALVFLG NTSADLNTAD
EEDEFGWRTV VHPDDYDRVA ARWRHCLRTG EHYDTEHRLR RTDGVYRWFR NSGRPSRDSE
GRITQWYGTT IDIEDQKQAE ATLRDREQEL SQLVDMVPSH LWRLTADGEP IFFNRRMIEF
IGMDVGDLGN SRRNRMEDLI DSFVHPDDAH AMKQALAQSL TTGQHFVMRY RLRRTDGVYH
WMSSRAEPLR DHVGRIVQWY GLCHDIDDQV KAEEAVRESE QQLQGIIDAV PVHIWSWTPS
GDLAYVSKRY LAHLGLSEAN FEDFTRVAQE LVHPDDAPGV QATAAASLAS GDAFAMRYRR
LSKDGAYRWM EGRCEPLHNR DGTILHWYGV SIDIDDQVRA EEALRASKRQ LEQMIDALPV
NILSFSPSGE MTYASKRYLE RVGIPPHIRN FDTLARDVAH PEDFPVMFRR ATDGFAAGTP
FVSRFRRREK DGVYRWIEAR AHPLRDTDDT IVQWYIAAID IEEEMHAQQA LRESERTLRQ
LIETLPALIY CAAPDGKPTY RSQQLTEFLG FGLDDKDETG VSRLVSTLDA IIHPDDLALV
HEKYGHSLAT GKPYALRHRL RRFDGVYRWV ETRAAPMCND EGEIVQWNGV CIDIDSEVRT
QEELRLAQDR LARASHAAGL AELSASIAHE VNQPLAAIVA NSHACHHWLS AEPANMERAK
ITVERIIRDA NGAADIVSRI RALFKQSTET RVVTPLSSVI TEIRELLTDE VTRRRVHMEV
DIADGLPPIA LDRVQIQQVL INLIRNGMEA MGSVPGRREL RLRVRFIEDA IRVELSDSGP
GIELSEKIFE PFFTTKERGM GMGLAICRSI VESHGGRLWA ENNTPHGATF VFALPVEATA
AA
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