Gene Plav_2353 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_2353 
Symbol 
ID5454904 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp2538565 
End bp2539308 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content56% 
IMG OID640877931 
Producthypothetical protein 
Protein accessionYP_001413622 
Protein GI154252798 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.8316 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value0.0884418 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAACAAGC ACCTCAGAGA ACCGCGATCC TTTACCGACC TCGAGAAGAT CAAAACCGAT 
GTCAAAAGGA TGAGCAGGGA GGCACGGGTC GTCTTCAGCA CCACCCATGG CCCTCTTCGC
ACGATCGTGA CGGGAACCAA GTGCCGTCCG ACAGGCGTCT ATAACAGCGT CAAGACCGGC
CATGCTCAGC CTTATGAATC CCAGGCCGAA CTGTTTTTCA TGCGGCAGTG CGAAGCCGAC
CACGAAGTAG TTGCCTGGCT TGCTCAGCCC CACCGGCTGG AAATCTTCGT CGAGGGAAAG
AAGCTCATCT ATTTCCCGGA TTTTTCAGTG CTCTATGCCG ACGGCCGGGA AGAGGTCGTC
GAGATCAAGA GGGACAAGGC AAGGGAAGTA TTTGGTGAAT TGGCCACCAA GTTGGAACGG
GCAGAACGCA TCTATCAAAC CGCCAACGTA GGGTTCCGTA TCCTCGATCT GTCTGACTTG
AGAGTAGAGC CCCGTTGTTC AAACGCCGAA GAAATCCAAC GGCACTCGAG AACACACTTC
GTGCGCAGCG AAGTTTTCTG GTTGATGGAT GAAGCCTGTC GCGATCCAAG CGGGACCATA
CCCTTTGCCC GAGCGGCTGA GATTCTGGGT GGCGGTGTCG TCGGCCACAA GAAGCTCTGC
GCGATGATTG TCAGGAGACA TTTCGGTTTG GATCTCGACG CCAGGCTGGT CGCCGACACG
CCTGTATCTC CCGTCTCGAC CTAG
 
Protein sequence
MNKHLREPRS FTDLEKIKTD VKRMSREARV VFSTTHGPLR TIVTGTKCRP TGVYNSVKTG 
HAQPYESQAE LFFMRQCEAD HEVVAWLAQP HRLEIFVEGK KLIYFPDFSV LYADGREEVV
EIKRDKAREV FGELATKLER AERIYQTANV GFRILDLSDL RVEPRCSNAE EIQRHSRTHF
VRSEVFWLMD EACRDPSGTI PFARAAEILG GGVVGHKKLC AMIVRRHFGL DLDARLVADT
PVSPVST