Gene Plav_2321 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_2321 
Symbol 
ID5454071 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp2493315 
End bp2494070 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content62% 
IMG OID640877900 
Producthypothetical protein 
Protein accessionYP_001413592 
Protein GI154252768 
COG category[S] Function unknown 
COG ID[COG2968] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.00571862 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCGAAGA ACCGGAATAC CATTCTCGCC GCCACCCCCC TAGCCGCTAT CGCCACCCTC 
GCCCTCTTTC TCGGATTCGT CCTTGCCGCA CCCGCCCATG CGCAGGAGAA GAACGAACCC
CGCACCATTA CCATCACGGG CGAAGGCAAG GCCATGGCCG CGCCGGACAT CGCCTATATC
TCGACCGGTG TCGTGACCGA AGGCGCGACG GCGGCTGAGG CCCTTGCCGC GAACACCAAG
GCGATGGCCG AAGTCTTTGC CGGGCTGAAG GATGCCGGTG TCGCGGAAAA GGACATGCAG
ACGTCGCAAT TCTCCGTCTA CCCCGTATAT GAGCAGCAGG ATCCGCAGAA GCAGGAACCG
CGCACGCCGA AAATCGGCGG CTATCGCGTG CAAAACCAGT TGACCGTGAC GGTCCGCGAC
TTGACGGCGC TGGGCGGCAT TCTCGACAAG GTCGTCTCGC TCGGCTCGAA CCAGATGAAC
GGCATCAGCT TCTCCATCGA CAAGCCGGAG CCGCTGCTCG ACGAAGCCCG CAAGGACGCC
GTGAAGGACG CGCTGCGGAA GGCAAAACTC TATGCCGGCG CGGCGGGCAT CTCGCTCGGC
CAGATCATGT CGATTTCGGA AAACGGCATC GGCATGCCGC CGCAGCCTTA CTATGCGAAG
GACATGATGA TGCGCGCCGA AGCCTCATCC GTTCCGGTCG CAGCCGGCGA ACAAACGATT
ACAGCAAGCG TCAACCTCGT CATTGCCATC GACTGA
 
Protein sequence
MPKNRNTILA ATPLAAIATL ALFLGFVLAA PAHAQEKNEP RTITITGEGK AMAAPDIAYI 
STGVVTEGAT AAEALAANTK AMAEVFAGLK DAGVAEKDMQ TSQFSVYPVY EQQDPQKQEP
RTPKIGGYRV QNQLTVTVRD LTALGGILDK VVSLGSNQMN GISFSIDKPE PLLDEARKDA
VKDALRKAKL YAGAAGISLG QIMSISENGI GMPPQPYYAK DMMMRAEASS VPVAAGEQTI
TASVNLVIAI D