Gene Plav_2315 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_2315 
Symbol 
ID5453674 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp2485598 
End bp2486062 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content64% 
IMG OID640877894 
ProductGatB/Yqey domain-containing protein 
Protein accessionYP_001413586 
Protein GI154252762 
COG category[S] Function unknown 
COG ID[COG1610] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.271761 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value0.0433719 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAGA GCCTGCGGGA CAGCATCAAG CAAGGGCTCA CCGAAGCCAC CAAGGCCCAG 
GACAAGCGCC GCATGTCGAC GCTGCGCCTC ATCCAGGCCG CCCTCAAGGA CCGCGACATC
GCCGGCCGCA CCGATGGGCG GGACGCAGGC GTGAGCGATG CCGAAATCCT CGAAGTCCTC
TCCAAAATGG TGAAGCAGCG CCGCGAATCG GTCGGCATGT ACGAATCCGC CGGCCGCATG
GAGCTTGCCC AGCAGGAGAA GGAAGAAATC GAGATCATCG AGAGCTTCCT GCCGAAGCAG
CTCTCCGACA GCGAGACGGA AGACGCCGTG GCCGCCGTGA TCGCCGAAAC CGGCGCCTCC
GGCATCAAGG ACATGGGCCG CGTGATGGGC GAGCTGAAAA AGCGCCATGC CGGACAAATG
GACTTCGCCA AGGCCGGCGC CATTGTGAAG GCGAAGCTGA CCTGA
 
Protein sequence
MSQSLRDSIK QGLTEATKAQ DKRRMSTLRL IQAALKDRDI AGRTDGRDAG VSDAEILEVL 
SKMVKQRRES VGMYESAGRM ELAQQEKEEI EIIESFLPKQ LSDSETEDAV AAVIAETGAS
GIKDMGRVMG ELKKRHAGQM DFAKAGAIVK AKLT