Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_2301 |
Symbol | |
ID | 5456917 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | - |
Start bp | 2468506 |
End bp | 2469318 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640877880 |
Product | peptidase M48 Ste24p |
Protein accession | YP_001413572 |
Protein GI | 154252748 |
COG category | [R] General function prediction only |
COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.114592 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 0.277953 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACGTCA ATCTTACATT TCTCGACCAG AAGCCGATTG AACTGAACCG CCGCCAGCTC GTGAAGGGTT TGGCTGCCGG CTATATCGTC GCGCTTTCGG GATGCGTAGA CAATCCGGCA TTGGGCAGGC AGCAACTGCT GCTCGTCTCC GAAGCGCAGA TGACCCAGCT CTCCGCCTCC GCGTGGTCCC AAATCCGCGA GCAGCAAAAA GTTTCCACGA ACCGGACCTT GAACAACCGC CTGAAGACGG CCGGTCCGCG TCTTGTGCAG GCGGCGGGCC TTCAAAACCA GGCCTGGGAA TACACCGTCT TTCAGGGCGA TGAGGCCAAT GCCTTCGTAC TGCCCGGCGG CAAAGTCGGC TTCTATGAAG GCATCTTCAA GCGGATGGAA AACGACGACC AGCTCGCCAC CGTTCTCGGC CACGAAATCG CGCATGTCGC CGCCCGCCAT TCGGCGGAGC GATACAGCCA GCAGGTGGCG TCGGGCATCG GCATGCAGGC GGCGCAGGTG GCGCTACAGG CAGGCGATGT CGGCGGCGCG GGCACCATCG CGGCCGTGCT CGGCGCGGGC CTGCAATTCG GCGTACTGCT CCCTTATTCC CGCACGCATG AACTGGAGGC CGACAGGCTT GGCCTCACCT ATATGGCGAA GGCCGGCTAC GACCCGCGCC AGTCGCTCCG CTTCTGGCAG AACATGACGG CTCAGCGCGG CAACGCCGCC CCGCCGCCGG AACTCATGTC GACACACCCC TCGGACACAA CGCGCATAGC CGCGCTGCAA CAGCAGCTCC GCAGCATGGG TTATCAGGTA TGA
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Protein sequence | MDVNLTFLDQ KPIELNRRQL VKGLAAGYIV ALSGCVDNPA LGRQQLLLVS EAQMTQLSAS AWSQIREQQK VSTNRTLNNR LKTAGPRLVQ AAGLQNQAWE YTVFQGDEAN AFVLPGGKVG FYEGIFKRME NDDQLATVLG HEIAHVAARH SAERYSQQVA SGIGMQAAQV ALQAGDVGGA GTIAAVLGAG LQFGVLLPYS RTHELEADRL GLTYMAKAGY DPRQSLRFWQ NMTAQRGNAA PPPELMSTHP SDTTRIAALQ QQLRSMGYQV
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