| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2279 |
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| Symbol | |
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| ID | 5455783 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 2446521 |
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| End bp | 2447573 |
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| Gene Length | 1053 bp |
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| Protein Length | 350 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640877858 |
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| Product | CaCA family Na(+)/Ca(+) antiporter |
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| Protein accession | YP_001413550 |
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| Protein GI | 154252726 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0530] Ca2+/Na+ antiporter |
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| TIGRFAM ID | [TIGR00367] K+-dependent Na+/Ca+ exchanger related-protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 59 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGAAA TGTATGCCTA TCTCATTGGC GGCCTGGTCA TCCTTCTTGT CTGCGGCGAT
TTCCTGGTCC GCGGCGCCAC CGCGCTGGCT GCCCGCTATG GCGTCTCGCC GCTTCTGATC
GCGCTCACCA TCGTCGCCTT CGGCACCTCC GCCCCGGAAC TCCTCGTCTC CATCCGCGCC
GCCCTTGCCG GCTCGCCCGG CATCGCGCTG GGCAATGTCG TCGGCAGCAA CATCGCAAAC
ATCTTCCTGA TCCTCGGCCT CCCGGCGCTC ATCTATCCGA TCGCCTGCAC CGGCCGTACC
GTGCCGCACA ACATGATCGT CATGATGGCG GCAAGCGTTC TGCTCATCGT TCTCTGCTTC
GTCGGTACGC TCTCTTTCTG GCAGGGCGTG CTGCTCATCT CGCTGCTCAC CGCCTATCTC
GTCTATTCCG GCTGGGACGC GCGGATGCAC CCCTACGACC CGCCGCCCCT CGCCGCCGAG
GAAGAGGCCA TCCCCGCGGT CGAAGCGCCC GCCGACGCCT TCTCCGACAC AAGCCATTTC
ATTACGCATG ACCTGCCGCA TGGCGACATT CATCCGCCGC ATCTCTCGCG CCTCGCCATC
GCCGCCAAGC TTCTTGTCGG CATTGTCGGC CTGCCCATCG GCGCACATCT CGTCGTCGAT
GGCGGTACGG AAATCGCTCA GGCTTTCGGC GTCTCCGATG CCGTCATCGG CCTGTCGCTG
ATCGCCGTCG GCACCTCGCT GCCCGAACTC GCCACCTCCG TCATGGCCGT CTTCCGCCGC
AACAACGACA TGGTGGTGGG TAACATCATC GGCAGCAACA TCATGAACAT TCTCGCGATC
CTCGGCGTCA CCGCGCTGAT CGCGCCTTTG CCGATAGACC CGGATTTCCT CCGCTTCCAT
CTCTGGGTCA TGCTCGCCGC CGTCGTCATG CTCCTGCCCA TGACCATGAC GCGCGGCAAG
GTCGGCCGCC TCACAGGTGT TGTTTTCCTC TGCGCTTATG GCGCATATCT CTATGCCATG
TTCGCCATGA GCCAGGGCGG CACTTTTATC TGA
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| Protein sequence | MIEMYAYLIG GLVILLVCGD FLVRGATALA ARYGVSPLLI ALTIVAFGTS APELLVSIRA
ALAGSPGIAL GNVVGSNIAN IFLILGLPAL IYPIACTGRT VPHNMIVMMA ASVLLIVLCF
VGTLSFWQGV LLISLLTAYL VYSGWDARMH PYDPPPLAAE EEAIPAVEAP ADAFSDTSHF
ITHDLPHGDI HPPHLSRLAI AAKLLVGIVG LPIGAHLVVD GGTEIAQAFG VSDAVIGLSL
IAVGTSLPEL ATSVMAVFRR NNDMVVGNII GSNIMNILAI LGVTALIAPL PIDPDFLRFH
LWVMLAAVVM LLPMTMTRGK VGRLTGVVFL CAYGAYLYAM FAMSQGGTFI
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