| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2278 |
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| Symbol | |
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| ID | 5454884 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 2445739 |
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| End bp | 2446509 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640877857 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001413549 |
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| Protein GI | 154252725 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 61 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGACCGGCA AAAGCCGAAA CGCATTGGTG ACAGGCGCAG CGCGCCGCAT CGGAAGGGAG
ATCGCGCTGG CGCTCGCCGA AGACGGCTGG TCCGTCGCCC TCTGCATTCG TCACGACCGG
TCGGATGAGG ACGCTCGGGA GGTACGGCAG GAAATCGAAG CCAAAGGCGT CCGCGCGGTC
ATTCTGAAAG CCGACCTTTC CGATCTTGCG GCGACGGAAG CTCTCGTGCC GGACGCGGCA
AAGGCGCTCG GCCCTCTCGC TCTCCTCGTC AACAACGCTT CCGAATTCTA TCCCGATGAA
GCCGGCACCA TGACCCCGAA GTCATGGAGC GACCATATGG ACGTCAACCT GCGGGCGCCC
GCCTTTCTCT CGCAGGCTTT TGCCGCCCAG CTCCCCGCCG GCGCCAAAGG CAATATCGTC
AACATCATCG ACCAGCGCGT CTGGGCGCCC ACGCCGAAAT TCCTGTCCTA CACCTTGAGC
AAGATGGCCC TGTGGGACAT GACGCAGGTA CTGGCGCGCT CCCTCGCGCC CCATATCCGC
GTAAACGGCA TCGGCCCCGG TCCCACTCTC GCCAACCAGC GCCAGTCGGC GGCCGATTTC
GAGCGCCAGA CCGCGTCCAC TATTCTCGGG CGCGGCACAA CCCCGGAAGA GATTTGCGCC
GCGCTCCGGT TTATCCTTGC GGCACCCGCC ATGACCGGGC AAATGATCGC CCTCGATGGC
GGGCAGCATC TCGCCTGGGA GACGCCGGAC GTAACCGGCA TTTCGGAATG A
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| Protein sequence | MTGKSRNALV TGAARRIGRE IALALAEDGW SVALCIRHDR SDEDAREVRQ EIEAKGVRAV
ILKADLSDLA ATEALVPDAA KALGPLALLV NNASEFYPDE AGTMTPKSWS DHMDVNLRAP
AFLSQAFAAQ LPAGAKGNIV NIIDQRVWAP TPKFLSYTLS KMALWDMTQV LARSLAPHIR
VNGIGPGPTL ANQRQSAADF ERQTASTILG RGTTPEEICA ALRFILAAPA MTGQMIALDG
GQHLAWETPD VTGISE
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