| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2276 |
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| Symbol | |
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| ID | 5456345 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 2443012 |
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| End bp | 2444946 |
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| Gene Length | 1935 bp |
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| Protein Length | 644 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640877855 |
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| Product | excinuclease ABC, C subunit |
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| Protein accession | YP_001413547 |
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| Protein GI | 154252723 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0322] Nuclease subunit of the excinuclease complex |
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| TIGRFAM ID | [TIGR00194] excinuclease ABC, C subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 59 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGACA TCGAAGACAA CGCTCCCGAA GCCCCCACCG TCCCCGGCGA CGGCGCGGAA
ACCCGTGCGA TTTCAACGCC CGGCGGGGCG GCCCTGATTG CCGAAAAGGT GAAATTGCTG
CCGGACAGCC CCGGCGTCTA CCGCATGTAC GGCACCGGCG GCGAGCTTCT CTATGTCGGT
AAGGCGCGCA GCCTGAAGAA GCGCGTCGCA AGCTATACCA AGCTTGCCGG CCATTCGAAC
CGCATCGCCC GCATGATCGC GTCCACGATC CAGATGGAAT TCATCTCGAC GGCCACCGAG
ACGGATGCCC TGCTCCTCGA AGCCAATCTC ATCAAGCGCC TGAAGCCCCG CTACAACGTG
CTGATGCGGG ACGACAAGTC CTTCCCCTAT ATCCTGCTGA CCGGAGACCA TGATTTCCCG
CAGGTCGTGA AGCATCGCGG CGGGCGCTCC CGCCCCGGCG ATTATTATGG GCCCTTTGCC
AGTGCCGGCG CCGTCACCGC CACGCTGAAT GCCTTGCAGA AGGCGTTCCT GCTCCGCTCC
TGCTCCGACA GCGTCTTTGA AAGCCGCACC CGTCCCTGTC TCCTGTTCCA GATCAAGCGG
TGCAGCGCCC CTTGCACCGG CGAAATCGAC CGCGAGAGCT ACGCCGTCCT TCTCGCCGAG
GCGCGCGACT TCCTGCGCGG CCGCAGCCGC AAGACGCAGC AGCAGCTTGT CGAATTGATG
GAGAAGGCTT CGGCCGACCT CGATTTCGAG CAGGCCTCGA TCTATCGCGA CCGCATCCGC
GCCCTGACGC AGATCCAGCA GCATCAGGGC ATCAACCCGC AAACCGTGAC GGAAGCCGAT
GTCTTCGCCG CATGGACGGA AGGTGGTCAG ACCTGCGTCC AGGTCTTCTT CTTCCGCGCC
GGGCAGAACT GGGGCAACCG CGCCTATTTC CCGCGCCACG ACAAGGAACT CTCCACCGAG
GAAGTCCTCG ATGCCTTCCT GGCGCAGTTC TACGAAGACC GTCCCCCTCC CCGCCTCGTG
CTTCTGAGCC ATGACGTGCC GGGCCGCGCC CTTCTCGCCG AAGCTCTCAC CATCCGCGCC
GGCCGCAAGG TCGCCGTCGG CTTGCCGAAG CGCGGCGAGA AGCGCCAGCT CGTCGACCAT
GCGCTGCTGA ACGCGCGCGA AGCCTTGGGC CGCCGCCTCG CGGAAAGCTC CTCGCAGCGC
AAACTGCTGG AAGGCGTCGC CGAGGCTTTC GGCCTCGAAC AGCCGCCCGC CCGCATTGAA
GTCTACGACA ACAGCCATAT TTCAGGCTCC CAGGCCGTGG GCGGCATGAT CGTCGCGGGC
CCGGACGGCT TCATGAAAAA CCAGTACCGC AAGTTCAACA TCAAGGGCGA CGACATCGAG
CCCGGCGACG ACTACGCGAT GATGCGCCAG GTGCTCACCC GCCGCTTTAC GCGCCTCCTG
AAGGAGAGCG AGGGCAAGCC GGCGGATGAA ACCTGGCCGG ACCTCCTCCT CATCGACGGT
GGCGCGGGGC AGTTGAAGGT GGCGCTCGAA GTGCTGGCCG AACTCGGCAT AGACAACGTC
ACCGCGGTCG GCGTCGCCAA GGGGCCCGAG CGTGACGCGG GCCGCGAGCG CTTCTTCATG
GCCGGGCGGC CGGATTTCAT GATGGAACCG CGAAATCCCG TTCTCTACTA CCTGCAACGT
CTGCGCGACG AGGCCCACCG CTACGCCATC GGCAGCCACC GCGCCCGCCG CTCGAAGGCG
ATCGGCGTAA ATCCGCTCGA CGATGTGCCA GGCGTCGGCC CCGGCCGCAA ACGTGCCCTG
CTGCAACATT TCGGCTCGGC CCGCGCCGTG GCGCGTGCCG GCCTCGCCGA TCTTGAATCC
GTGGAGGGCA TCAGCGCCAA AGTGGCGCGC GCCGTTTACG ATCATTTCCA CGGAAATCCG
GATAGCGCGC CTTGA
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| Protein sequence | MNDIEDNAPE APTVPGDGAE TRAISTPGGA ALIAEKVKLL PDSPGVYRMY GTGGELLYVG
KARSLKKRVA SYTKLAGHSN RIARMIASTI QMEFISTATE TDALLLEANL IKRLKPRYNV
LMRDDKSFPY ILLTGDHDFP QVVKHRGGRS RPGDYYGPFA SAGAVTATLN ALQKAFLLRS
CSDSVFESRT RPCLLFQIKR CSAPCTGEID RESYAVLLAE ARDFLRGRSR KTQQQLVELM
EKASADLDFE QASIYRDRIR ALTQIQQHQG INPQTVTEAD VFAAWTEGGQ TCVQVFFFRA
GQNWGNRAYF PRHDKELSTE EVLDAFLAQF YEDRPPPRLV LLSHDVPGRA LLAEALTIRA
GRKVAVGLPK RGEKRQLVDH ALLNAREALG RRLAESSSQR KLLEGVAEAF GLEQPPARIE
VYDNSHISGS QAVGGMIVAG PDGFMKNQYR KFNIKGDDIE PGDDYAMMRQ VLTRRFTRLL
KESEGKPADE TWPDLLLIDG GAGQLKVALE VLAELGIDNV TAVGVAKGPE RDAGRERFFM
AGRPDFMMEP RNPVLYYLQR LRDEAHRYAI GSHRARRSKA IGVNPLDDVP GVGPGRKRAL
LQHFGSARAV ARAGLADLES VEGISAKVAR AVYDHFHGNP DSAP
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