Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_2270 |
Symbol | |
ID | 5455427 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | - |
Start bp | 2439355 |
End bp | 2439873 |
Gene Length | 519 bp |
Protein Length | 172 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640877849 |
Product | MarR family transcriptional regulator |
Protein accession | YP_001413541 |
Protein GI | 154252717 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.689924 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 63 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGTAA CGGCAAAGCC CCTCAAATCC TCCAACCGCC CTTTGGCGGC GGAAGCCGAC CGCCTGACCG AGGCCATCGA ACTGCTGTTT TTCGCCTATC GCGACTTCAT CAGCGATCCT GACGAGCTCC TCGCGGAGTA TGATTTTGGC CGCGCCCATC ATCGTGTGGT CCATTTTGTA GGCCGGAATC CAGGCATTAC CGTGGCCGAA TTGCTGAACA TTTTGCGGAT CACAAAACAG AGCCTCGCAA GGGTGCTGAA GCAATTGATC GAGCGCGGCT TTATCGAGCA GGAAACAGGA AAGCAGGACC GGCGTCAGCG GCTTCTCTTT TTGACCCCCA AGGGCAGCGA ACTGGCCGAG CGTCTGGCCA TACCGCAAAG GAACCGTGTC GCCCAGGCGC TCGAGAAAGC AGGCCCCGGC TCGGATGAAG CATGGCGGAA AGTTCTGCTG GCACTCGTCA ATGATGAAGA CAGACCCGAA GTAGAACATC GCATTGCCAA AGCACCGGCA CGCGGCTAG
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Protein sequence | MAVTAKPLKS SNRPLAAEAD RLTEAIELLF FAYRDFISDP DELLAEYDFG RAHHRVVHFV GRNPGITVAE LLNILRITKQ SLARVLKQLI ERGFIEQETG KQDRRQRLLF LTPKGSELAE RLAIPQRNRV AQALEKAGPG SDEAWRKVLL ALVNDEDRPE VEHRIAKAPA RG
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