Gene Plav_2270 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_2270 
Symbol 
ID5455427 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp2439355 
End bp2439873 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content58% 
IMG OID640877849 
ProductMarR family transcriptional regulator 
Protein accessionYP_001413541 
Protein GI154252717 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.689924 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones63 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGTAA CGGCAAAGCC CCTCAAATCC TCCAACCGCC CTTTGGCGGC GGAAGCCGAC 
CGCCTGACCG AGGCCATCGA ACTGCTGTTT TTCGCCTATC GCGACTTCAT CAGCGATCCT
GACGAGCTCC TCGCGGAGTA TGATTTTGGC CGCGCCCATC ATCGTGTGGT CCATTTTGTA
GGCCGGAATC CAGGCATTAC CGTGGCCGAA TTGCTGAACA TTTTGCGGAT CACAAAACAG
AGCCTCGCAA GGGTGCTGAA GCAATTGATC GAGCGCGGCT TTATCGAGCA GGAAACAGGA
AAGCAGGACC GGCGTCAGCG GCTTCTCTTT TTGACCCCCA AGGGCAGCGA ACTGGCCGAG
CGTCTGGCCA TACCGCAAAG GAACCGTGTC GCCCAGGCGC TCGAGAAAGC AGGCCCCGGC
TCGGATGAAG CATGGCGGAA AGTTCTGCTG GCACTCGTCA ATGATGAAGA CAGACCCGAA
GTAGAACATC GCATTGCCAA AGCACCGGCA CGCGGCTAG
 
Protein sequence
MAVTAKPLKS SNRPLAAEAD RLTEAIELLF FAYRDFISDP DELLAEYDFG RAHHRVVHFV 
GRNPGITVAE LLNILRITKQ SLARVLKQLI ERGFIEQETG KQDRRQRLLF LTPKGSELAE
RLAIPQRNRV AQALEKAGPG SDEAWRKVLL ALVNDEDRPE VEHRIAKAPA RG