Gene Plav_2261 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_2261 
Symbol 
ID5455484 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp2432110 
End bp2433180 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content63% 
IMG OID640877840 
Producthypothetical protein 
Protein accessionYP_001413532 
Protein GI154252708 
COG category[S] Function unknown 
COG ID[COG1565] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCAC CGCTCGCGCG CCAAATAGCC CGGCTGATCG AACAGACGGG CCCCATCCCG 
CTTTCTCAAT ATATGGCGCT CGCCCTCGGT CACCCCGAGC ACGGCTACTA CATGACCCGC
GACCCTCTCG GCGCGCGGGG CGATTTCGTG ACGGCGCCTG AAATCAGCCA GATGTTCGGC
GAATTGGTCG GCCTGTGGCT TGCCGATCAA TGGCTTGAAC AGGGCTCACC GAAACCATTT
GTTCTGGCCG AGCTCGGGCC TGGACGCGGC ACACTTATGG CCGACGCCCT GCGCGCCATT
GCTGCCGTGC CGCACATGGT GGAAGCGGCC TCGATACATC TGGTCGAAAC GAGCCCGGTG
TTGCGGAATG CCCAAAGCAA ACGCATTCCG CAGGCGCATT GGCATGAGCA TGTCGACGAT
TTGCCCGACC TCCCGCTCTT TCTCGTCGCC AATGAATTTT TCGATGCGCT GCCGGTGACG
CAATATCAGC GAACGGAGCG CGGCTGGTGC GAACGGTTTG TCAGCATGGC GGAAGGACGT
TTCGTTCCCG TGCTCGCACC GGTGCCGCTT GCGGACGACA GCGGCCTGCC CGCTGCCATG
AAAGCAGCGC AGGAAGGCAG CATCGCCGAG GTTTCTCCCG CCTCCACTTC TATTACAGAA
ACGATTGCCC ATCGCATTGC CCGGCGCGGC GGCGCGGCGC TCGTCATTGA TTATGGCCAT
GTCTCAAGTG CTCCGGGCGA CACGCTGCAG GCCTTGAGGG ACCACAAGTT TGCAGATCCT
TTCGAGGCTC CGGGTGAGGC CGACCTCACG GCACATGTCG ACTTCGAAGC TCTCTCACAC
GCGGCGAGCG CCGCCGGAGC GGCCGCTCAT GGAGCGGTGG AACAAGGCAG GTTTCTCATG
GCATTGGGGA TCGAGGCGCG TGCCGAAGCG TTGAGCAGAA ACGCAACACC CGCCCAGCGG
GAAGATATCG CTTCGGCCAT GCAGCGGTTG ACCGCAAGGG ACGGGATGGG CAGCCTTTTC
AAGGTACTGG GTATCACCCC GCGCGGCGCG CCTTCGCCCG CCGGCTTCTG A
 
Protein sequence
MTSPLARQIA RLIEQTGPIP LSQYMALALG HPEHGYYMTR DPLGARGDFV TAPEISQMFG 
ELVGLWLADQ WLEQGSPKPF VLAELGPGRG TLMADALRAI AAVPHMVEAA SIHLVETSPV
LRNAQSKRIP QAHWHEHVDD LPDLPLFLVA NEFFDALPVT QYQRTERGWC ERFVSMAEGR
FVPVLAPVPL ADDSGLPAAM KAAQEGSIAE VSPASTSITE TIAHRIARRG GAALVIDYGH
VSSAPGDTLQ ALRDHKFADP FEAPGEADLT AHVDFEALSH AASAAGAAAH GAVEQGRFLM
ALGIEARAEA LSRNATPAQR EDIASAMQRL TARDGMGSLF KVLGITPRGA PSPAGF