| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2258 |
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| Symbol | |
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| ID | 5456523 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 2429144 |
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| End bp | 2430079 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640877837 |
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| Product | ribose-phosphate pyrophosphokinase |
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| Protein accession | YP_001413529 |
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| Protein GI | 154252705 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0462] Phosphoribosylpyrophosphate synthetase |
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| TIGRFAM ID | [TIGR01251] ribose-phosphate pyrophosphokinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.284821 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 57 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAACTGG TCGCGGGTAA TTCCAACAGG GCACTCGCCG AAGCCATCGC CGCATACCTC
AATCTCCCGC TTACGAAATC GGTCGTCCGC CGCTTCGCGG ACATGGAGGT CTTCGTCGAA
ATTCAGGAAA ACGTCCGCGG CGAGGACGTC TTCGTGATCC AGTCGACCTC CTACCCGGCC
AACGACCACC TGATGGAAAC GCTCATCATC ATGGATGCGC TGAGGCGCGC TTCGGCGCGG
CGCATCACGG CCGTGATCCC CTATTTCGGC TATGCGCGGC AGGACCGAAA GCCCGGCGCC
CGCACGCCCA TTTCGGCAAA GCTCGTCGCC AACCTGGTCG TAACGGCAGG CGCCGACCGC
GTGCTGACGC TTGATCTTCA TGCCGGCCAG ATCCAGGGCT TCTTCGACAT TCCGACGGAT
AATCTGTTCG CGGCGCCGGT CCTCACGCGC GACATCGAAC AGCATTACAA GACGAGCAAC
GGCGTCATGG TCGTCTCGCC CGACGTCGGC GGCGTGGTCC GCGCGCGTGC CATTGCGAAA
CGCATCGGCG CCGACCTCGC CATCGTCGAC AAGCGCCGCG AACGCGCGGG CGAGTCCGAG
GTCATGAACA TCATCGGCGA CGTGAAGGGC CGCTCCTGCA TTCTCGTCGA CGACATCGTC
GACAGCGCGG GAACCCTCTG CAACGCCGCC GAAGCACTGC TGAAAGAGGG CGCGACCGAA
GTCTCCGCCT ATGTGACGCA TGGCGTTCTC TCCGGCGGCG CGGTCGCCCG CGTCTCCGCC
TCGCAGCTCA AGGAACTCGT CATCACGGAT TCGATCCAGG CGACGGAAGC CGTCCGCGTC
AGCCACAATA TAAGGGTCGT CTCCATCGCC CCGCTGATCG GCGAGGCCAT GCGCCGGACC
GCCGAGGAAC GCTCGGTTTC GAGCCTTTTC GACTGA
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| Protein sequence | MKLVAGNSNR ALAEAIAAYL NLPLTKSVVR RFADMEVFVE IQENVRGEDV FVIQSTSYPA
NDHLMETLII MDALRRASAR RITAVIPYFG YARQDRKPGA RTPISAKLVA NLVVTAGADR
VLTLDLHAGQ IQGFFDIPTD NLFAAPVLTR DIEQHYKTSN GVMVVSPDVG GVVRARAIAK
RIGADLAIVD KRRERAGESE VMNIIGDVKG RSCILVDDIV DSAGTLCNAA EALLKEGATE
VSAYVTHGVL SGGAVARVSA SQLKELVITD SIQATEAVRV SHNIRVVSIA PLIGEAMRRT
AEERSVSSLF D
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