| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2256 |
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| Symbol | |
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| ID | 5457004 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 2427699 |
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| End bp | 2428316 |
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| Gene Length | 618 bp |
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| Protein Length | 205 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640877835 |
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| Product | aminoacyl-tRNA hydrolase |
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| Protein accession | YP_001413527 |
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| Protein GI | 154252703 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0193] Peptidyl-tRNA hydrolase |
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| TIGRFAM ID | [TIGR00447] peptidyl-tRNA hydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.281218 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATCCTGC TCGTCGGTCT CGGAAATCCA GGCGAGAAGT ACGCACGGAA CCGGCACAAT
ATCGGATTCA TGGCGGCGGA CGGCATCGTT CGCCGCCATT CCTTTTCGCC GCCGCGCGCA
CGCTTTCAGG GCATCGTTTC GGAAGGCACG CTGGACGGCG AAAAGGTCAT CGTCCTGAAG
CCGACCACCT ACATGAACGA AAGCGGACGC GCCGTCGGCG AAGCGATGCG CTTCTACAAG
CTGACACCGG CGGACGTGGT CGTCTTCTAT GACGAACTCG ACCTCGAACC CGGCAAGGTC
CGCATGAAGA CCGGCGGCGG CGCGGCAGGC CATAACGGCA TTCGCTCCAT CGCCGCCCAT
ATCGGCCCGG AGTTCCGCCG TGTACGGATC GGCATCGGCC ATCCGGGCGC CAAGGACCGC
GTGCTCGGCT ATGTGCTTGG CGATTTCTCG AAGGCCGAAA CCGCCGACTG GGTGGAGACG
CTGATCGAGG CGATTGCCGA TGCGGCGCCG CTGCTCGCGA CGGGCAAGGA CGCGACATTC
GCGAACAAGG TGCATCTCGC GCTCAACCCC GAGCCCGAGA AGAAGCCGAA AACAAAAGAG
AAAGACGGAG ACGAGTAG
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| Protein sequence | MILLVGLGNP GEKYARNRHN IGFMAADGIV RRHSFSPPRA RFQGIVSEGT LDGEKVIVLK
PTTYMNESGR AVGEAMRFYK LTPADVVVFY DELDLEPGKV RMKTGGGAAG HNGIRSIAAH
IGPEFRRVRI GIGHPGAKDR VLGYVLGDFS KAETADWVET LIEAIADAAP LLATGKDATF
ANKVHLALNP EPEKKPKTKE KDGDE
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