| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2252 |
|---|
| Symbol | |
|---|
| ID | 5453873 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | - |
|---|
| Start bp | 2424659 |
|---|
| End bp | 2425348 |
|---|
| Gene Length | 690 bp |
|---|
| Protein Length | 229 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640877831 |
|---|
| Product | dienelactone hydrolase |
|---|
| Protein accession | YP_001413523 |
|---|
| Protein GI | 154252699 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0412] Dienelactone hydrolase and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.359164 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 50 |
|---|
| Fosmid unclonability p-value | 0.352697 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCACA AGGGCAAGAC GATCACGCTG AAGAGCGGCG ACGGAGCGGA CATCCTCTGC
TACCACGTGA AGGCGGAGGG CACGCGCCCG AACGGCAAGA AGGCTGGACT CGTTCTCATC
ATGGAAATCT TCGGCGTCAC CGATCACATC AAGGATCTCT GCGACGAATA TGCCGCGCGC
GGCTATGACG TGCTGGCGCC GCAGCTCTAT GACCGGCACG TGAAGGACTT CCAGGCGACC
TACGAGCAGG CGGATATCCA GAAGTCGCTC GAACTGCGCG CAAAGAACCC TTACGAGAAC
ACGGTGCTCG ACGCGCAGAT GTGCATCGAC AAGCTGCGCG CCGATGGCTG CGAGAAGGTC
TTCATCACCG GCTATTGCTA TGGCGGCACG GTGAGCTGGG TGGCGGCCTG CCGCGCGAGC
GGCCTCGACG CCGCGTCCTG CTATTACGGC GGCGCAATCA AGGACTTCAT CGGCGAGACC
CCGAAATGTC CGACGATCTG CCATTTCGGC GAGAAGGACC ACGGCATCCC GATGGAAGAC
GTGCGCCGCA TCGACGCCGC GCATCCCGAA GTGAAGGTCT ATGTCTACGA CGCCGACCAC
GGCTTCAATT CGGACCGCCG CAACAATTAC GACAAGGCAT CGGCGGAACT GGCGCTGGAA
CGGACGCTGG CGCTGTTCGA CGGAGCGTGA
|
|---|
| Protein sequence | MAHKGKTITL KSGDGADILC YHVKAEGTRP NGKKAGLVLI MEIFGVTDHI KDLCDEYAAR
GYDVLAPQLY DRHVKDFQAT YEQADIQKSL ELRAKNPYEN TVLDAQMCID KLRADGCEKV
FITGYCYGGT VSWVAACRAS GLDAASCYYG GAIKDFIGET PKCPTICHFG EKDHGIPMED
VRRIDAAHPE VKVYVYDADH GFNSDRRNNY DKASAELALE RTLALFDGA
|
|---|
| |