Gene Plav_2252 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_2252 
Symbol 
ID5453873 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp2424659 
End bp2425348 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content62% 
IMG OID640877831 
Productdienelactone hydrolase 
Protein accessionYP_001413523 
Protein GI154252699 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0412] Dienelactone hydrolase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.359164 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value0.352697 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCACA AGGGCAAGAC GATCACGCTG AAGAGCGGCG ACGGAGCGGA CATCCTCTGC 
TACCACGTGA AGGCGGAGGG CACGCGCCCG AACGGCAAGA AGGCTGGACT CGTTCTCATC
ATGGAAATCT TCGGCGTCAC CGATCACATC AAGGATCTCT GCGACGAATA TGCCGCGCGC
GGCTATGACG TGCTGGCGCC GCAGCTCTAT GACCGGCACG TGAAGGACTT CCAGGCGACC
TACGAGCAGG CGGATATCCA GAAGTCGCTC GAACTGCGCG CAAAGAACCC TTACGAGAAC
ACGGTGCTCG ACGCGCAGAT GTGCATCGAC AAGCTGCGCG CCGATGGCTG CGAGAAGGTC
TTCATCACCG GCTATTGCTA TGGCGGCACG GTGAGCTGGG TGGCGGCCTG CCGCGCGAGC
GGCCTCGACG CCGCGTCCTG CTATTACGGC GGCGCAATCA AGGACTTCAT CGGCGAGACC
CCGAAATGTC CGACGATCTG CCATTTCGGC GAGAAGGACC ACGGCATCCC GATGGAAGAC
GTGCGCCGCA TCGACGCCGC GCATCCCGAA GTGAAGGTCT ATGTCTACGA CGCCGACCAC
GGCTTCAATT CGGACCGCCG CAACAATTAC GACAAGGCAT CGGCGGAACT GGCGCTGGAA
CGGACGCTGG CGCTGTTCGA CGGAGCGTGA
 
Protein sequence
MAHKGKTITL KSGDGADILC YHVKAEGTRP NGKKAGLVLI MEIFGVTDHI KDLCDEYAAR 
GYDVLAPQLY DRHVKDFQAT YEQADIQKSL ELRAKNPYEN TVLDAQMCID KLRADGCEKV
FITGYCYGGT VSWVAACRAS GLDAASCYYG GAIKDFIGET PKCPTICHFG EKDHGIPMED
VRRIDAAHPE VKVYVYDADH GFNSDRRNNY DKASAELALE RTLALFDGA