| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2248 |
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| Symbol | |
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| ID | 5454943 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 2422006 |
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| End bp | 2422656 |
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| Gene Length | 651 bp |
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| Protein Length | 216 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640877827 |
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| Product | class II aldolase/adducin family protein |
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| Protein accession | YP_001413519 |
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| Protein GI | 154252695 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases |
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| TIGRFAM ID | [TIGR00760] L-ribulose-5-phosphate 4-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.589142 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 0.160982 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCGCGA CAGACGAGGC ATGGCTCCGC CAGCGCGTCG TCGATGCGGC GCTCGACCTC
GCCGCCACCG GCCTCTCGCC GCAAATGTCC GGCAATGTTT CGGCACGGGC AGGGGACAGC
ATCTTCATCA CGCCATCGGG CATCGCCTAT ACCGATCTCA TCCCGGACGA TCTTTCCGAA
ATCGCGCTGG ACGGGCGCAT CCTCTCCGGC CCCTTTCCGC CGTCGAGCGA ATGGCAGATG
CATTGCGCGA TCTACAAGGC CCGGCCGGAG GCAGGCGGCA TCGTCCATGC CCATTCCGAT
TTCGCCACCG TGCTCGCCGT GATGAAGCGG CCCATCCCCG CCTTCCACTA CATGGTGGCC
GTCGCCGGCG GGCGCGACAT CCGCTGCGCG CCCTACGCCA CCTTCGGCAC GGCGGACCTG
GCCGCCCATG CCGTCGCCGC CCTCGCGGAC CGCAAGGCAT GCCTCCTCGC CCATCACGGC
CAGATCGCCA TCGGCGAAAC CGTCGAAGCC GCCCTCCACC TCGCCCATGA AGTCGAAACG
CTCGCCGCGC AATACTGGCG CGCCTTGCAA ATCGGCGAAC CGGACCTGCT CTCCGACGAA
GAGATGGCAG TGAATGTCGA GAAGTTCAGG AATTACGGCA GGCGCGGGTA G
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| Protein sequence | MTATDEAWLR QRVVDAALDL AATGLSPQMS GNVSARAGDS IFITPSGIAY TDLIPDDLSE
IALDGRILSG PFPPSSEWQM HCAIYKARPE AGGIVHAHSD FATVLAVMKR PIPAFHYMVA
VAGGRDIRCA PYATFGTADL AAHAVAALAD RKACLLAHHG QIAIGETVEA ALHLAHEVET
LAAQYWRALQ IGEPDLLSDE EMAVNVEKFR NYGRRG
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