Gene Plav_2246 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_2246 
Symbol 
ID5456212 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp2420365 
End bp2420892 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content64% 
IMG OID640877825 
Productadenine phosphoribosyltransferase 
Protein accessionYP_001413517 
Protein GI154252693 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0503] Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins 
TIGRFAM ID[TIGR01090] adenine phosphoribosyltransferase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.111495 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value0.31564 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGTGA AAGACTTCAT CCGCACCATC CCGGATTATC CGAAGCCGGG CATCCTTTTC 
CGTGACATCA CCACGCTGCT CTCCGACCCC GAAGGGTTTC GCGGCGCGGT CGATGCGCTG
GTGTCGCTGC ACAAGGGCGC GAAGTTCGAT GTCGTGGCCG GCATCGAGGC GCGCGGCTTC
ATTCTCGGCG GCGCCGTCGC GCATCAGCTC GGTCTCGGCT TCATTCCCGT CCGCAAGAAG
GGCAAGCTGC CCTTCACCAC CATCGGCCAG GAATACGATC TCGAATATGG CACCGACATG
GTCGAGATCC ACACCGACGC CGTGAAGCCG GATCAGCGCG TGCTGCTGAT CGACGATCTG
ATCGCCACCG GCGGCACGGC GGAAGCCGCC GTGAAGCTCA TCGCGCGGGC GGGCGGCAAT
GTCCTCGCCT CGAGCTTCGT CATCGAACTG CCGGAGCTTG GCGGCCGCGC CCGCCTCGAA
GCGCTCGACA TCGAGGTGCT CTCGCTCTGT TCCTTCGAGG GACATTGA
 
Protein sequence
MDVKDFIRTI PDYPKPGILF RDITTLLSDP EGFRGAVDAL VSLHKGAKFD VVAGIEARGF 
ILGGAVAHQL GLGFIPVRKK GKLPFTTIGQ EYDLEYGTDM VEIHTDAVKP DQRVLLIDDL
IATGGTAEAA VKLIARAGGN VLASSFVIEL PELGGRARLE ALDIEVLSLC SFEGH