Gene Plav_2235 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_2235 
Symbol 
ID5454210 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp2411046 
End bp2411696 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content65% 
IMG OID640877814 
Producthypothetical protein 
Protein accessionYP_001413506 
Protein GI154252682 
COG category[S] Function unknown 
COG ID[COG3816] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones64 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGCCT CGACGGGAAA GACCGGCACA AAAGCGGAAA AGTCCGAATC GGGCAGTGCC 
CCGGGCGGGC TCAAGGGTCT CGCCGCCGCC GAGGATGCGG GCAAGAAGGC GAAGGGCCTG
CCGCCGGTTC ACCTGTGGAA TCCGGAATTC TGCGGCGATC TCGACATGCG GATCGCGCGG
GACGGCACCT GGTTCTACAT GGGAACGCCG ATCGGCCGCG AGCGGCTGGT GCGTCTTTTC
TCCACCGTTC TGCGCCATGA CGAAGACGGG AAATATTATC TCGTGACCCC GGTCGAGAAG
GTGGGGATCA CGGTCGAGGA TGCGCCCTTT CTGGCAGTCG CCATGAAAGT CGAGGGCGAG
GGCAGGGAGC AGCGCCTCAC CTTCACCACC AATGTCGGCG ACGACGCGAC GGCGGGCCCC
GACCATCCGA TGCGCTTCGA GATCGACAAG GAGACCGGGG AGCCCGCCCC TTACGTCCAT
GTCCGCGCCC GGCTCGATGC GCTCATCAAC CGCGCGATCT TCTACGATCT CGTGGCGCTC
GGCGTGGAAG AAGAGCATGA AGGACGCGCG TGGTTCGGGG TCTGGTCCGG CGGCGTCTTC
TTTCCGTTCA TGCCGGCGGA GGAGATGGCC CGTCAGGCCG ACCGTTCATG A
 
Protein sequence
MAASTGKTGT KAEKSESGSA PGGLKGLAAA EDAGKKAKGL PPVHLWNPEF CGDLDMRIAR 
DGTWFYMGTP IGRERLVRLF STVLRHDEDG KYYLVTPVEK VGITVEDAPF LAVAMKVEGE
GREQRLTFTT NVGDDATAGP DHPMRFEIDK ETGEPAPYVH VRARLDALIN RAIFYDLVAL
GVEEEHEGRA WFGVWSGGVF FPFMPAEEMA RQADRS