| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2225 |
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| Symbol | |
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| ID | 5453720 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 2398999 |
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| End bp | 2399913 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640877804 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001413496 |
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| Protein GI | 154252672 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.973292 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 58 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGACTTC TGGAAGGCAA GGTCGTACTC GTCACCGGCG CGGCCGGCGG CATCGGCAGG
GAATGCGCGC TGATCGCGGC GGCGCAGGGC GCGAAAGTCG TCGTGAACGA TCTCGGCGGC
AGCGTGAAGG GCGGCGATGC GGGCGATGCG AGCGCCGCGC AGAAGACCGT CGATGAAATC
AAGAAGGCGG GCGGCGAAGC CGTCGCCAAT TCCGACAGCG TCTCGATGAA GTCCGGCGCG
GAAAACATGA TCGCCCAGGC GCTCGACACC TTCGGCGGCC TTCACTCCAT CATCAGCCCG
GCCGGCATTC TCCGCGACGG CATGTTCCAC AAGATGCCGG ACGAGGACTG GGACGCCGTT
CTCGAAGTCC ATCTGAAGGG CAGCTACAAC ATCACCCGCG CGGCGATCAA TCATTTCCGC
GAAAAGGAAG AAGGCAATTT CGTCCTCTTC ACCTCGACCT CCGGCCTCAT CGGCAATATC
GGCCAGGCGA ACTACGCCGC CGCGAAGATG GGCATTGCCG GCCTCTCGCG CATCATCGCG
ATGGAAGGCG CGGCAAAGAA CGTCCGCTCC AACATCATCG CGCCCTTCGC CTGGACGCGC
ATGATCGCCA CCATTCCGGT GAAGGACGAA ACGTCGGCAA AGCGCGTCGA GCGCATGAAG
AATGCGATGC GCGCCGAACA GGTCGGCAAT TTCGCCGTCG CCCTCGCCGC GCCGAGCTGC
ACCGCCAACG GCCAGATCTT CGCCGTGCGC GGCAATGAGC TGGTGCTCTT CTCGCAGCCC
CGCCCCGTCA AGTCCGTCGC CCGCATCGAC GGCTGGACCC CGGAAACCAT CCTCTCCCAC
GCCTTCCCCG CCATGGAAGG CGGCTACACC GACCTCGGCG CAACCGGCGC CGTGTTCACC
TGGGAACCGG TGTAA
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| Protein sequence | MGLLEGKVVL VTGAAGGIGR ECALIAAAQG AKVVVNDLGG SVKGGDAGDA SAAQKTVDEI
KKAGGEAVAN SDSVSMKSGA ENMIAQALDT FGGLHSIISP AGILRDGMFH KMPDEDWDAV
LEVHLKGSYN ITRAAINHFR EKEEGNFVLF TSTSGLIGNI GQANYAAAKM GIAGLSRIIA
MEGAAKNVRS NIIAPFAWTR MIATIPVKDE TSAKRVERMK NAMRAEQVGN FAVALAAPSC
TANGQIFAVR GNELVLFSQP RPVKSVARID GWTPETILSH AFPAMEGGYT DLGATGAVFT
WEPV
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