| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2223 |
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| Symbol | |
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| ID | 5454104 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 2396631 |
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| End bp | 2397563 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640877802 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001413494 |
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| Protein GI | 154252670 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.499839 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 59 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGTCG ATCTCAATGG CTATGCGGTT TATGCCAAGG TCGTGGAGCT TGGCGGTTTC
ACCGCCGCCG CCGATGCGCT GGGCCTTTCC AAATCCATGG TCAGCCGCCA TGTGGCGACG
CTGGAAGATG AACTCGGCGT CCGCCTGCTG AACCGCACCA CGCGGCGCAT CAGTGTGACC
GAGGCGGGAG GGGTGGTGTT CGAGCGTGCC CAGCGGATCG TCGCGGAGGC GGCGGAGGCG
GCAAACGAGG CCACCTGCGT CGAGGGCGCG GTGCGCGGCC TTCTCAGGGT CAACGCGCCG
ATGACCTTCG GTATCCGGCA GCTCGGGCCG GTCATGCCGG AATTTCTCGC CCGATATCCC
GATCTCAATG TCGACCTTAC GCTCAATGAC AGACGTGTCG ATCTCATAGA GGAAGGTTTC
GACGTAAGCT TGCGCGTTTC GGCGCTTACG GATTCAAGCC TGATCGCCCG GCAGCTCGCG
CCGGTGGAGC GGCATATCGT CGGCGCGCCC GGCTATTTCG AGAAGCATGG CGTGCCGAAA
AGCCCCACCG ATCTCGCGGG CCATGATTTC CTGCTCTACA CGCTGCTTGC GCGGCCGACG
CATCTGGAAA TGACGCATGA GGACGGGCGG CGCGAACAAG TGGAAGTGAA GGGCCGCATG
TTCTGCAACA ATGCAGACGC GATGCTGGAG ACGATTGCCG CCGGGGCGGG CCTTGCGCTG
CTGCCGGATT TCATCGGCTG CGACCATATG AAGAGCCGCG CGTTTGTCCG CGTGCTGGAA
GACTGGTCGA TGCCGCCGCT GACGCTGCAT GTCCTCTATC CGCATTCCCG CCACCTGCCC
GCGAAGGTGA GGGCTTTCGT GGATTTCGCG GTGGAGAAGT TCGGACCGGG GAAGGCGCCT
TGGGGGGCGG AGTATGAGAT GTTCACTTTT TAA
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| Protein sequence | MAVDLNGYAV YAKVVELGGF TAAADALGLS KSMVSRHVAT LEDELGVRLL NRTTRRISVT
EAGGVVFERA QRIVAEAAEA ANEATCVEGA VRGLLRVNAP MTFGIRQLGP VMPEFLARYP
DLNVDLTLND RRVDLIEEGF DVSLRVSALT DSSLIARQLA PVERHIVGAP GYFEKHGVPK
SPTDLAGHDF LLYTLLARPT HLEMTHEDGR REQVEVKGRM FCNNADAMLE TIAAGAGLAL
LPDFIGCDHM KSRAFVRVLE DWSMPPLTLH VLYPHSRHLP AKVRAFVDFA VEKFGPGKAP
WGAEYEMFTF
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