Gene Plav_2215 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_2215 
Symbol 
ID5455550 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp2390859 
End bp2391725 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content69% 
IMG OID640877794 
Productmethyltransferase type 11 
Protein accessionYP_001413486 
Protein GI154252662 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0250997 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGTTT CCCCGCAAAC GATTGCCGCC ACCGGCCCCA ATGCCGAACA GATCGACTAT 
TGGAACGGCG ATGCCGGCGA CAAATGGGCC CAGAATCGGG ACCGTCTCGA CGCGATGCTG
CAGCCCTTCT CCGAAGCGGT CCTGCGGCTC GCATCGGCAA AGCCGGGCGA GCGCGTTCTC
GACATCGGCT GCGGCTGCGG CGCCACCACA TTCGAGCTGG CGGCGCAGGC GGGAAGCGCG
CTCGGCGTCG ATATTTCCGC CCCCATGGTC GCTCGCGCGC GGGAGCGGGC GGCGGCGCTG
AAAAGCCCGG CGGAATTCGC GCTGGCCGAT GCCGCGACGC ATCCCTTCGC GCCCGCCTCC
TTCGACATTC TCGCCTCGCG TTTCGGCATC ATGTTCTTTC TCGAGCCCGT CCCCGCCTTC
GCGCATCTGC GCCAGGCGCT CGCTCCCGGC GGCCGCATCG CCTTTGTCTG CTGGCGGCCG
CTGAAGGAGA ACGCGTGGGT CTCCGTGCCG CTCTTCGCCG CCCTGCCTCA TCTTCCGGCG
CCTGAGCCCG CGACGCCCGG CGCCCCCGGC CCCTTCGCCT TCGACGATCC GGAGCGTTTT
CGCCGCGTGT TGACGGAAGC AGGCTTCGGC TCCATCGCCA TCGAACCGCA TGACGCGCTC
CTCTCGATGA GCGGAGAAGG CGACCCGGTG GAAACGGCGC TGCGGCAGAC GCTTGAAATA
GGCCCGCTTG CCCGTCTCCT GAAGGAGCAG GAAGAAGCGC CGCGCCGCCG CGCCGTCGAT
GCCGTACGCG AAGCCCTCGC CCGTCACGTT AAGGATGGCA AGGTCAGGCT GGGCGGCGCC
GTGTGGCTCG TCACCGCCCG GGCATGA
 
Protein sequence
MSVSPQTIAA TGPNAEQIDY WNGDAGDKWA QNRDRLDAML QPFSEAVLRL ASAKPGERVL 
DIGCGCGATT FELAAQAGSA LGVDISAPMV ARARERAAAL KSPAEFALAD AATHPFAPAS
FDILASRFGI MFFLEPVPAF AHLRQALAPG GRIAFVCWRP LKENAWVSVP LFAALPHLPA
PEPATPGAPG PFAFDDPERF RRVLTEAGFG SIAIEPHDAL LSMSGEGDPV ETALRQTLEI
GPLARLLKEQ EEAPRRRAVD AVREALARHV KDGKVRLGGA VWLVTARA