| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2188 |
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| Symbol | |
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| ID | 5455037 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 2368317 |
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| End bp | 2369705 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640877766 |
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| Product | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
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| Protein accession | YP_001413459 |
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| Protein GI | 154252635 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
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| TIGRFAM ID | [TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 63 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGTTAT CACCCGATAT TCACTGCCGG TTCGGCAGTT TTTGCCGGGT AAAGGCGGCT
GCGCCTTACA CTTGCGGTCG GCGGCAAGCT CCATATGATG CGCGGCTTCG ACGACCTCTC
TCTTCGCCGC CAATACAGAT GGAACGCCGG ATGATCCGGG CAGCTGCAAT GCGTAATGCT
TTCGACGAAA TGACTGGCCT CAATAGCCTC GATCTTCCGG GACGTCCGGA GGATACGCGT
GTGGTTGTCG CGATGTCGGG TGGGGTGGAT AGCTCTGTGA CGGCGGCGCT TCTGAAGGAG
CAGGGCTACG ATGTGGTCGG TATCACTTTG CAGCTCTACG ATCATGGGGC TGCGGTGTCG
CGCAAGGGCG CTTGTTGTGC GGGACAGGAC ATTCAGGATG CACGCCGCGT GGCGGACCAG
ATAGGCATCC CGCATTATGT GCTCGATTAT GAAGACCGGT TTCGCCGGGC CGTCATGGAT
GACTTTGCCG ACTCTTATGC CGCGGGCGAA ACTCCCATTC CCTGCGTCCG ATGTAACGAG
CGTGTGAAAT TTCGCGATCT TCTCGATACG GCGCGAGACC TAGGCGCGGC CGCGCTTGCT
ACCGGACACT ATATTGCGAG CAGGCGGGGC GCTGCCGGCC GGGAGCTTCA CCGTCCGCGC
GACGAGGAGA GAGACCAGAG CTATTTCCTG TTCGCGACTA CGCAGGAGCA ACTTGAGTTT
TTGCGGTTTC CCCTTGGAGA ATTGACCAAA CCGGAAGCGC GAGCATTGGC CGACCGAATG
GGGTTGGAAG TTGCAGGCAA GCCGGACAGC CAGGATATTT GTTTCGTGCC TACGGGCCGC
TACACCACCA TCGTCGAGAA GCTGAGGCCT GGAGCGTCCG CGCCGGGAGA GGTTGTTCAT
CTCGATGGGC GCGTGCTTGG CCGTCATAGC GGCATTGTCA ATTTCACGAT CGGCCAGCGT
CGCGGCCTCG GTATCGGTGC AAGCGAGCCG GTAAGCGAGC CCCTCTTTGT CGTGAAGCTC
GATCCCCTAA AGCGGCAGGT CATCGTGGGC CCCAGGGAGG CGCTGGAGAC GCAAAAGCTC
ACGCTTCGCG ACATCAACTG GCTGGGTGAT GGGCCTTTTG CGGAACTCCC CGGAGAGGGA
CTCAAAATAG TTGCCAAGGT CCGGTCGACC CGACCTCCGG TTCCCGCGCG TCTCTTCCGC
ACCGGGGAAG GCGCGGTCGT TGAACTCCTT GAAAGTGAGG GGGGTGTCGC TCCGGGCCAG
GCGTGCGTTT TCTATGACGG CGGTGGCGGC CAGCGGGTAC TTGGGGGTGG CTGGATCGTC
CGGACGGAAA GTTGCTGGCA GGTACCTGAG GCTGGCACCT CGAGGGTTGC GGCGCCGACG
GCAGACTGA
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| Protein sequence | MALSPDIHCR FGSFCRVKAA APYTCGRRQA PYDARLRRPL SSPPIQMERR MIRAAAMRNA
FDEMTGLNSL DLPGRPEDTR VVVAMSGGVD SSVTAALLKE QGYDVVGITL QLYDHGAAVS
RKGACCAGQD IQDARRVADQ IGIPHYVLDY EDRFRRAVMD DFADSYAAGE TPIPCVRCNE
RVKFRDLLDT ARDLGAAALA TGHYIASRRG AAGRELHRPR DEERDQSYFL FATTQEQLEF
LRFPLGELTK PEARALADRM GLEVAGKPDS QDICFVPTGR YTTIVEKLRP GASAPGEVVH
LDGRVLGRHS GIVNFTIGQR RGLGIGASEP VSEPLFVVKL DPLKRQVIVG PREALETQKL
TLRDINWLGD GPFAELPGEG LKIVAKVRST RPPVPARLFR TGEGAVVELL ESEGGVAPGQ
ACVFYDGGGG QRVLGGGWIV RTESCWQVPE AGTSRVAAPT AD
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