| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2180 |
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| Symbol | |
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| ID | 5456682 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 2360071 |
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| End bp | 2361438 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640877758 |
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| Product | two component, sigma54 specific, Fis family transcriptional regulator |
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| Protein accession | YP_001413451 |
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| Protein GI | 154252627 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 63 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCTTC TGATCGTCGG AACACTCAAC GGACAGCTCT CAACCGCCAC GAAAATGGCG
ATGTCGAAGG GCGCCAAGGT CACCCACACG GAAACCGTCA ATCAGGCGAT CGATGCGCTG
CGCGCGGGTC GCGGCGCGGA CCTTATGATG GTGGACGTTG CGGCCGACAT CGCGGACCTC
ATCGCCCGCC TTCAGGTCGA GCATATTTGC ATTCCCGTGG TTGCCTGCGG CGTCGAAACC
GACGCGCGCG CGGCCGTCAA CGCTATCCGC GCCGGCGCGA AGGAATACAT ACCGCTGCCG
CCCGATGCAG AGCTCATTGC CGCCGTCCTG GCTGCCGTGG CGGACGAAAG CCACGCGCTG
ATCTTTCAGG ACCCAAAAAT GGCGAGCGTC GTCAAGCTCG CCGACCAGGT GGCAACCTCC
GAAGCTTCTA TCCTGATCAC CGGAGAGTCC GGCACCGGCA AGGAAGTTAT GGCTCGTTAT
GTCCATAGCC ATTCACTTCG CCGCGACAAG CCATTCATTT CGGTCAACTG CGCCGCAATT
CCGGAAAACC TTCTGGAGTC CGAGCTTTTC GGGCATGAAA AGGGCGCCTT TACCGGGGCC
GTGGCACGCC GCATCGGCAA GTTTGAAGAG GCAGACGGCG GCACTCTTCT TCTCGACGAA
ATCAGCGAAA TGGACATCCG TCTGCAGGCC AAGCTTCTGC GCGCAATCCA GGAGCGCGAG
ATTGACCGTG TCGGCGGAAA GACACCGGTG AAGGTAAACA TCCGCATTAT CGCGACCTCC
AACAGGAACC TGCAGGCGGA GGCTCGGGCT GGGCGCTTCC GCGAGGATCT GTTTTACCGA
CTCAACGTTG TGAACCTGCA GCTGCCGCCC CTGCGCGAGC GCTCTGCCGA CGTCCTGGCT
CTCGCGGATC ACTTCGCCGT CCGCTACGCA AAGACCAACG GCCTTTCTCC TAAGCCGATC
TCCGTGGAGG CCCGTCGCTT TCTGACCCGG CATCAATGGG CCGGCAACGT GCGTGAACTC
GAGAATACGA TGCATCGCGC CGTTCTCCTC ACAACAGGGA GCGAGATCGA TGTGGAAGCA
ATCCGCCTTC CGGACGGAAC AAGGCTCGAG GATGCGGCTC TTGATGGTGT TGCATACAAA
GCTGCCAGCG CGGCCGAGGC GGCTTCGCGC GCCTTTGTCG GCAAAACGGT AGCCGAAGTG
GAGCAGGATC TTATCCTGCA GACCCTCGAT CACTGTCTCG GCAATCGCAC TCATGCAGCC
AACATTCTTG GCATCTCTAT CCGGACGCTG CGGAACAAGC TCAAGGAATA CGGCGAACAA
GGCGTTCCCG TGCCTACACC GGGCGAAGTC CGCGCCTATT TCGGTTGA
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| Protein sequence | MRLLIVGTLN GQLSTATKMA MSKGAKVTHT ETVNQAIDAL RAGRGADLMM VDVAADIADL
IARLQVEHIC IPVVACGVET DARAAVNAIR AGAKEYIPLP PDAELIAAVL AAVADESHAL
IFQDPKMASV VKLADQVATS EASILITGES GTGKEVMARY VHSHSLRRDK PFISVNCAAI
PENLLESELF GHEKGAFTGA VARRIGKFEE ADGGTLLLDE ISEMDIRLQA KLLRAIQERE
IDRVGGKTPV KVNIRIIATS NRNLQAEARA GRFREDLFYR LNVVNLQLPP LRERSADVLA
LADHFAVRYA KTNGLSPKPI SVEARRFLTR HQWAGNVREL ENTMHRAVLL TTGSEIDVEA
IRLPDGTRLE DAALDGVAYK AASAAEAASR AFVGKTVAEV EQDLILQTLD HCLGNRTHAA
NILGISIRTL RNKLKEYGEQ GVPVPTPGEV RAYFG
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