Gene Plav_2177 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_2177 
Symbol 
ID5453802 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp2356772 
End bp2357257 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content55% 
IMG OID640877755 
Productputative nucleotide-binding protein 
Protein accessionYP_001413448 
Protein GI154252624 
COG category[S] Function unknown 
COG ID[COG1666] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value0.946938 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTTCGT TCGACATTGT CTCCAAAACC GATTTTGCCG AGATCGATAA CGCGCTTCAG 
AATGTGACGC GCGAAATCAG CCAGCGGTAC GACTTCAAGG GCGCGCACTG CACGGTGGAG
CGGAAGGATC AGGAGCTGAC GATTAATGCA GATGACGATC TGAAGCTAAA GCAGATGCAT
GAATTGCTGC AGGGGCATTT GGCCCGCCGA AACGTCGAGG CAGGGGTTCT GGATTACAAG
GAACCGGAGA AGGCGGCCGG GCAAAGCGTG CGCCAAAAGG TGGCAATCCG CGATGGGCTC
GACAAGGAGC TTGCGAAGCG GATTGTAAAG GACATCAAGG GATCCGGCCT GAAGGTTCAA
GTCGCCATTC AGGGTGACGA GCTGAGAGTC TCGGGAAAGA AACGAGACGA CCTCCAGGCC
GTAATCCAGT TTGTGAAGGG GCTGAAGATC GAGCAGCCCC TGCAATATGA AAATTTCCGC
GACTAG
 
Protein sequence
MPSFDIVSKT DFAEIDNALQ NVTREISQRY DFKGAHCTVE RKDQELTINA DDDLKLKQMH 
ELLQGHLARR NVEAGVLDYK EPEKAAGQSV RQKVAIRDGL DKELAKRIVK DIKGSGLKVQ
VAIQGDELRV SGKKRDDLQA VIQFVKGLKI EQPLQYENFR D