Gene Plav_2171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_2171 
Symbol 
ID5455676 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp2351473 
End bp2351823 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content60% 
IMG OID640877749 
Producthypothetical protein 
Protein accessionYP_001413442 
Protein GI154252618 
COG category[S] Function unknown 
COG ID[COG3784] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.224547 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones63 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACCTTT TTCCGAAATC CATACTCGCG ATGCTGATGC TGGCGGCTTC CGTCTTTGCC 
GCCGCACCTG CTTTGGCCAT CGATCTCGAT TCAGCCAAAG CCCAGGGGCT GGTCGGCGAG
CAGCTGACCG GTTACATCGG CATTGTCACA GCCAGCCCAA CGCCCGAGGT CAGGACGATG
GTGAATGAGA TCAATCTGCG CCGGCGCGCC TCCTATCAGG AGATTGCCGC AAAGACTCCG
GGGGCGACTT TGAACGCTGT TGAAAAGCTT GCCGCGGAGA AGCTCATCGC CAAAACTCCC
TCCGGGCAAT ATGTCCAGAA CGCGGCCGGC CAGTGGGTGA AGAAGCCCTG A
 
Protein sequence
MHLFPKSILA MLMLAASVFA AAPALAIDLD SAKAQGLVGE QLTGYIGIVT ASPTPEVRTM 
VNEINLRRRA SYQEIAAKTP GATLNAVEKL AAEKLIAKTP SGQYVQNAAG QWVKKP