Gene Plav_2162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_2162 
Symbol 
ID5455879 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp2343067 
End bp2343390 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content62% 
IMG OID640877739 
Productputative transcriptional regulator 
Protein accessionYP_001413433 
Protein GI154252609 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.63856 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones68 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGACCC GTGACGCAAG CCAAACCATT GTCGAGCGCA TCCGCCGCGA CCCCGCTTTC 
GCGCGCGGGG CGCTGACGGA AGCGGCGACT GTCTTTCTCG GCGGCGAACC GGAAGTCGCG
CGTCTGATGC TGCGGGATAT CGTGAACGGC ACGCTCGGCT TCGAGGAGCT TTCCGCACTT
ACCGGCATAC CGCCGAAAAG CCTTCACCGC ATGTTGTCGA GCCGGGGCAA CCCAAGCATG
GACAATCTCG CCGCAATCTT CGAGGCGATG ACGGGACACC TGAAGGTCGA TGTGGAGGCA
CGAGCGAAGA AGAAGGCGAC ATAA
 
Protein sequence
MLTRDASQTI VERIRRDPAF ARGALTEAAT VFLGGEPEVA RLMLRDIVNG TLGFEELSAL 
TGIPPKSLHR MLSSRGNPSM DNLAAIFEAM TGHLKVDVEA RAKKKAT