Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_2160 |
Symbol | |
ID | 5454755 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | - |
Start bp | 2341247 |
End bp | 2342596 |
Gene Length | 1350 bp |
Protein Length | 449 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640877737 |
Product | HipA domain-containing protein |
Protein accession | YP_001413431 |
Protein GI | 154252607 |
COG category | [R] General function prediction only |
COG ID | [COG3550] Uncharacterized protein related to capsule biosynthesis enzymes |
TIGRFAM ID | [TIGR03071] HipA N-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 68 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGCCG CACAGCCCGA CATTCTGGAC GTGCGCTTGG AAGCCGCCGA CATTCCACTC GGGCATCTGG CGCGCAAGGA TGGCGGCTGC CGCTTCGCTT ATACGCCAGA CTATCTCGCG CGCACCGACG CCATGCCGCT CTCGTTGTCC CTGCCGCTGC GCGAGGAACC TTACGGCGAT GTCGAGTCAC GCGCCTTTTT CGACAACCTG CTACAGGAAA ACGATCAGCT TCAGCAGACG ATGGACCGCG AACGTATCGC CCGCGACGAC ATTGTCGGCC TGCTGAGTTT TGTCGGCGGC GACTGCGCGG GCGCGATCAG TTGCCTGCCG CCGGGAAGCG GCCCGGTCAA GGTTCCGGGT AACCTCGCCA CGGATTACGA CGAACTGCCG CGCGAGGAAC TCATCGATAT CATGCGCCGC CTCGCAGACA AGTTGCCCTT ACCGGACGCC ATAAAAGACC CGTCGCCGGT TGCAGGCGTG CAGCGCAAGA TCGCGCTGAC AGAAATCGCG AAGGGCCGTT TCGGCCTGCC GAAGCCCGGC CTGCGCGTGC CGACGACGCA TATATTGAAG GTGCCGGAGC GCCGACTGGC ACGCGAAGTG TTGCTGGAAG CCGTTGCCAC GCGACTGGCG CATGCCGTGG GGCTCGAGGT CGCCATACCG GCGGAATTCA AACTCGACGA CGAAGCCGGC TTGTTGAGCT TGCGCTTCGA CCGCCGCATC GACGTCAATA GCGTGACGCG CATCCACCAG GAAGATTTCT GTCAGGCATT GGGCCTGCCT GCTCGCCTCA AATATGAGCG CAACGGAACG GCAGAATTGC GCTTCGCGGC CACCGCCGTT TCAGACCTGC TCGGCCGCAC CGCCGCGCCG GCAAGAGACA AGCGCAGCTT CATGGTGTCG GCGTTTTTCA ATCTCGCGAT CGGCAATAAC GACAATCACG CGAAGAACCA TGCGCTGCTT TACGACACGG GGCCTATACC GCGCCTTGCG CCGCTTTACG ACCTGCAACC CGTGCGGCTG ACCGGGCGCT ATACCGACGA GCTGGCCTTC AGGATCGGCG CCGCCGACCG CTTCGACACG GTGACGGCGG GCGACATCGC CGCTTTCATG GCGGCTTTCG GGCCGGGCAC GGCGACGGCG CAGCGGCGCT TCATCGAGGG TGAAGTCGGG CCGATGCTGG CGGAGCTGGA CAGGCAGACG GCTGTGCTGC CTTCGCATGG ATTGAAGGAT TTCGACGATC TGATCGGCCG CGAAATCTCG CAGCTTGCGG ACCTGCTTGG GCTCAAGCTG GCGACCAGGG AGCGGGACTA TTTCACGGAA AAGGGCGGCG GCTGGGGACA ATTGAGCTGA
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Protein sequence | MSAAQPDILD VRLEAADIPL GHLARKDGGC RFAYTPDYLA RTDAMPLSLS LPLREEPYGD VESRAFFDNL LQENDQLQQT MDRERIARDD IVGLLSFVGG DCAGAISCLP PGSGPVKVPG NLATDYDELP REELIDIMRR LADKLPLPDA IKDPSPVAGV QRKIALTEIA KGRFGLPKPG LRVPTTHILK VPERRLAREV LLEAVATRLA HAVGLEVAIP AEFKLDDEAG LLSLRFDRRI DVNSVTRIHQ EDFCQALGLP ARLKYERNGT AELRFAATAV SDLLGRTAAP ARDKRSFMVS AFFNLAIGNN DNHAKNHALL YDTGPIPRLA PLYDLQPVRL TGRYTDELAF RIGAADRFDT VTAGDIAAFM AAFGPGTATA QRRFIEGEVG PMLAELDRQT AVLPSHGLKD FDDLIGREIS QLADLLGLKL ATRERDYFTE KGGGWGQLS
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