| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2154 |
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| Symbol | |
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| ID | 5454847 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 2335613 |
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| End bp | 2337169 |
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| Gene Length | 1557 bp |
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| Protein Length | 518 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640877731 |
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| Product | phospholipase D/transphosphatidylase |
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| Protein accession | YP_001413425 |
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| Protein GI | 154252601 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1502] Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0310472 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 68 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCGTC CCGGCTTTCT GCCGCTCATT TTCGGGCTTT CTCTGCTACT TGCCGCCTGC
GCTTCCGTGC GGCAAGACCC GTCGCTTGCG CCCGGTGCCG CGCTGGCCAA GCCGGAGGAG
ACCGCGCTCT GGCATGCGCT GGTGCCGCCG GAGGAAGCCG CCCGGGGCCA TTCCGGCTTC
TTCTTCCTCG AAGGCGGGCT CGACGCCTAT GAGACGCGCC TTCTCGCCAT CGAATCGGCG
GCGCGCACTA TCGATCTTCA ATATTACATC TGGGATTTCG ACGGCAGCGG CCGCGCCATC
AGCGAGGCGC TCTTTCGCGC GGCGGAGCGT GGCGTCCATG TCCGCGCGCT GGTCGATGGC
TATCTGGTCG ACAATGACTC CGAGCCGCTG AAGCAGATCG TCAATCATCC CAATATCGAC
GTGCGCATCT ACAATGCCTT CCGCACCTCC TTCTGGCCGC GTTATCTGCG CTACGGCGAA
TTGCTGATCG ACTTTCCGCG CCTCAATCAG CGCATGCACA ACAAGATCAT CGCGGTCGAC
AATACCGTCG CCATCGTCGG CGGGCGCAAT GTGAACGACA CTTATTTCGC GCTCGACGGG
GATCATTATT TCCTCGACCT CGATGTCGTC ATCGCCGGTC CGCTGACGAA GGACGTGTCC
GCGAGCTTCG ATGCCTTCTG GAACAGTCCC TATGCCGTTC CGGTCGAGCA TTTCGTGGAA
GACGAGACCA TTCCCTTCAG CTTCGCCACT GTCTGGAACG AGATTTTCGC CTATGACATG
GAGGCCTTTC CGTTGCCGCG CCGCCTCGAG GTCATGGAGC TGGCGGAAAA ATATATCGCG
CTGGAGAAGC GTTTCGTCTG GGCGCCCGCG TCGCTCGTGC TCACCGCGCC CGGTCCCGTC
TTTCAGGATA TCGCCGTGCC GCCCGGTCAG CAGATCGAAA CCGCGATGCT CTCTCATATC
GCCTCGGCGG AGCGGGAAGT CCTGATCCAG AACCCCTATG TGATGATGAC GGAGCCCCGT
GCCGCGGTGC TTGCCGATGC GCAGGCGCGC GGCGTGCGCA CCATCCTTCA GACCAATTCG
CTCGCCTCGC ATGATTCCGC GCTCGTCCAT TACGGTTTCG TGCGCGACAG GAAGAAGTTT
ATGGGGAACG GCGTCGCGCT TTACGAGCTG AAGCCCCGCC CGGATAACAG CAGGAACATG
CCCGGCATCG GCCTCACGCC GGAAAAGACC ACGCTCCACT CGAAGACCAT CGTCTTCGAC
CGCCGCTATG TGTTGGTCGG CTCCTTCAAT CTCGATCCCC GCTCCATCGA CTACAACTCC
GAAATCGGCA TCCTGATCGA AAGCCCCAAG CTCGCCTCGC GCGTCGCCGG GGCCATCGAG
GTCGATCTCG CGCCGGAGAA CAGCTGGCGG GTGGTCGGGG ACGGGGAGGG GGGTATCGTC
TGGCTGGACG AGACCGAGAC GCCGCCGCTC CGCCTCGACA CCGAGCCGGA GACGAGCTTC
GTCGAACGGA TTCCCGTCTG GCTCGGCTAT GTCCTGCCCA TCGACCACCT GCTGTAA
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| Protein sequence | MTRPGFLPLI FGLSLLLAAC ASVRQDPSLA PGAALAKPEE TALWHALVPP EEAARGHSGF
FFLEGGLDAY ETRLLAIESA ARTIDLQYYI WDFDGSGRAI SEALFRAAER GVHVRALVDG
YLVDNDSEPL KQIVNHPNID VRIYNAFRTS FWPRYLRYGE LLIDFPRLNQ RMHNKIIAVD
NTVAIVGGRN VNDTYFALDG DHYFLDLDVV IAGPLTKDVS ASFDAFWNSP YAVPVEHFVE
DETIPFSFAT VWNEIFAYDM EAFPLPRRLE VMELAEKYIA LEKRFVWAPA SLVLTAPGPV
FQDIAVPPGQ QIETAMLSHI ASAEREVLIQ NPYVMMTEPR AAVLADAQAR GVRTILQTNS
LASHDSALVH YGFVRDRKKF MGNGVALYEL KPRPDNSRNM PGIGLTPEKT TLHSKTIVFD
RRYVLVGSFN LDPRSIDYNS EIGILIESPK LASRVAGAIE VDLAPENSWR VVGDGEGGIV
WLDETETPPL RLDTEPETSF VERIPVWLGY VLPIDHLL
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