| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2152 |
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| Symbol | |
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| ID | 5455012 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 2332461 |
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| End bp | 2334206 |
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| Gene Length | 1746 bp |
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| Protein Length | 581 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640877729 |
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| Product | amidohydrolase 3 |
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| Protein accession | YP_001413423 |
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| Protein GI | 154252599 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3653] N-acyl-D-aspartate/D-glutamate deacylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.288153 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 68 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGAGC ATGATCTCGT GATCCGGGGC GGCACCATTG TCGACGGGAC GGGCGCGAAG
CCTTTTACCG GCGATGTGGC CATTGATGGC GGCAAGATTT CGGCGGTGGG CAAGGTGGAA
GGCACGGGCC GCCGCGAGAT CGATGCGCAG GGGCTGCTCG TCACGCCGGG CTTCGTCGAC
ATCCACACCC ATTACGATGC GCAGGCGACA TGGGACCCCT GGCTCACGCC GTCCTCGCAG
CATGGCGTGA CGACCGTCGT CATGGGGAAT TGCGGCGTCG GTTTCGCGCC GGTGAAGCCG
GAGGCGCGGA GCGAACTCAT CGACCTCATG GAAGCGGTGG AGGACATTCC GGGCGCGGCG
ATGCACGAGG GCATCAAATG GGAATGGGAA AGCTTCCCGG AATTTCTCGA TGCGCTGGAC
AAGCGCCGCT ATGCCGCCGA TATCGGCACG CAGATGCCGC ATTGCGCGCT GCGCGTCTAT
GTGATGGGCG CGCGCGGCAT CGACAATGAA CCGGCGACGG CGGACGACAT CAGACAAATG
CGCGACCTCA CCTATGAGGC GATGAAGGCG GGCGCGCTCG GCTTCTCGAC CTCGCGGACC
GACCTCCACA ACACGCTGAA GGGCGACCCG GTGCCCGGCA CACTGGCGGC GAATGACGAG
CTTTTCGGCA TCGCCGATGC GCTGAAGGAA CACGGGTCCG GCGTTTTCCA GATCGCGGCG
ACGCATCGCG AGATGGAACA GGAATTCGAC TGGATGTTGA AAATGGCGAA GGAGACCGGC
CGCATGGTCA CCTTCCAGGT GCAGCAGATC GATGAGGCGC CGGACCTTTA TAAAAAGATG
CTGGCGCATC TCGACCGGGC GCGCGCCGAA GGCGTGACCA ATATTCGCGG CCAGCATTCG
GGACGGCCGG TCGGCCTGCT GATGGGCTGG CAGACCTCCG TGCATCCCTT TATCGGCTTC
CCGGAATACC GGCCTTACGC GCAGATGCCT TTCGCGGAGC GAATCGAGAA GCTGAAGGAC
CCGAAGGTGC GCGCAGAAAT CACCGGCGGG AAGAATGTCG ACAAGCTCGG CGCTTTCGGC
ACTTTCATCA CGACGTCATT TCACAAGATG TATCCGATGG GCGCGCGCGA GAATTACGAG
CCTTCGCCGG ATGACAGCGT GGCCGCCGTG GCAAGGCGCG AGGGCAAGAC GCCCACCGAA
CTCGCCTATG ACGCGATGAT GATGAATGAC GGGCAGGCGA TGCTTTATTT TCCGCTGTTC
GGCTATTCGA CCAACGACTA CACGGCGATC GAGGAAACGC TGCGCCACCC GCAGACCGGC
CTCAGCCTTG CCGATGGCGG CGCCCATGTC GGCGCGATCT GCGACGGCGG CACGCCGACC
TTCATGCTGA CGCATTGGGC GCGGGACCGG ACAAGGGGGC CGAAGCTGCC CATCGAGGAG
ATCATCCGCA TCCAGACGAA GGACACGGCG GAACAATACG GGCTTTACGA CCGGGGCGTG
CTTGCGCCCG GCATGAAGGC CGATCTGAAC GTGATCGACT TCGAGAACCT TTCCTTCACC
CATCCCGAAA TGCGCTTCGA CCTGCCGGCG GGCGGCCGAC GCCTCTGGCA GGGCGCGAAG
GGCTACCGCG CGACGGTGCT TTCCGGTGTC ATCGTGGCGG AGAATGACGA GCCGACGGGG
GAACTGCCGG GGCGGCTCAT TCGCGGGGTG CAGGGGAAGG CGCGCGCGGA GAGCGCGGCG
GCTTAA
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| Protein sequence | MAEHDLVIRG GTIVDGTGAK PFTGDVAIDG GKISAVGKVE GTGRREIDAQ GLLVTPGFVD
IHTHYDAQAT WDPWLTPSSQ HGVTTVVMGN CGVGFAPVKP EARSELIDLM EAVEDIPGAA
MHEGIKWEWE SFPEFLDALD KRRYAADIGT QMPHCALRVY VMGARGIDNE PATADDIRQM
RDLTYEAMKA GALGFSTSRT DLHNTLKGDP VPGTLAANDE LFGIADALKE HGSGVFQIAA
THREMEQEFD WMLKMAKETG RMVTFQVQQI DEAPDLYKKM LAHLDRARAE GVTNIRGQHS
GRPVGLLMGW QTSVHPFIGF PEYRPYAQMP FAERIEKLKD PKVRAEITGG KNVDKLGAFG
TFITTSFHKM YPMGARENYE PSPDDSVAAV ARREGKTPTE LAYDAMMMND GQAMLYFPLF
GYSTNDYTAI EETLRHPQTG LSLADGGAHV GAICDGGTPT FMLTHWARDR TRGPKLPIEE
IIRIQTKDTA EQYGLYDRGV LAPGMKADLN VIDFENLSFT HPEMRFDLPA GGRRLWQGAK
GYRATVLSGV IVAENDEPTG ELPGRLIRGV QGKARAESAA A
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