Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_2123 |
Symbol | |
ID | 5456739 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 2304081 |
End bp | 2304581 |
Gene Length | 501 bp |
Protein Length | 166 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640877700 |
Product | peptidoglycan-associated lipoprotein |
Protein accession | YP_001413394 |
Protein GI | 154252570 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
TIGRFAM ID | [TIGR02802] peptidoglycan-associated lipoprotein |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.089577 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 0.358435 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGTCCC CGAATGCTGG CCTGCGGTTC GCCGCTGTGG CTGCTGCTTT TCTGATGTTG GCCGCGTGCA GCTCGACCGA TGATTCTGCC AACGCCAATC CGTCTTCGTC TTCTTCCGGC CAGATCACGC CTGGTTCGCA GGAAGACCTG GTTGCCAATG TTGGCGACCG CGTGTTCTTC GACACGGACC AGTCCTCGCT GAGCGACGAA GCCCGTGCGA CCCTGCAGCG TCAGGCTGCA TGGATGCAGC TCTACCCGAA CCTCACCTTC ACCGTCGAAG GTCATGCCGA CGAGCGCGGC ACCCGCGAGT ACAACCTTGC GCTGGGTGGC CGTCGTGCCA ACTCCGCGAA GGATTACCTC GTGAGCCTCG GCGTCGATGG CGGCCGTCTC AACACCGTGT CCTACGGCAA AGAGCGTCCG GTGTGCCTCG ACTCGAACGA GAACTGCTGG GCCCAGAACC GTCGCGCTGT GACGGTCGTA GCGTCCGGCG CCGCGAGCTA A
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Protein sequence | MKSPNAGLRF AAVAAAFLML AACSSTDDSA NANPSSSSSG QITPGSQEDL VANVGDRVFF DTDQSSLSDE ARATLQRQAA WMQLYPNLTF TVEGHADERG TREYNLALGG RRANSAKDYL VSLGVDGGRL NTVSYGKERP VCLDSNENCW AQNRRAVTVV ASGAAS
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