Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_2120 |
Symbol | |
ID | 5455846 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 2301070 |
End bp | 2301528 |
Gene Length | 459 bp |
Protein Length | 152 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640877697 |
Product | biopolymer transport TolR |
Protein accession | YP_001413391 |
Protein GI | 154252567 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0848] Biopolymer transport protein |
TIGRFAM ID | [TIGR02801] TolR protein |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.0523748 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 51 |
Fosmid unclonability p-value | 0.245656 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGATGT CCGTCGGAGG CAAGAAGTCT GGGCGTGGAC GGTTTGCACG CCAGCCTATG TCAGAGATCA ACGTGACGCC GGTCGTCGAC GTCATGCTCG TGCTCCTTAT CGTCTTCATG GTGGCGGCGC CGTTGCTCAC TGTGGGTGTG CCCGTCGATC TGCCGAAGAC ACAGGCAGCG CCCATTTCCG GCGACAACGA ACCGCTCACG ATCACGATCA ACGGTGAGGG AACGATCTTC GTGCAGGAAA CGCAGGTCGA AGCGGATGCG CTGGTGGAGC AACTTCTGGC GATCGCGGAG AATGGCTACG AGCAGCGCAT CTTCGTGCGC GCGGATAGCG GGATCAGTTA CGGGAAGGTC ATGGACGTGA TGGGCCGTAT AAGCTCATCG GGTTTTTCAA AGGTCGGTCT CGTAACGGAG ACGGACACCG CGCCGGCGAA GAAGCCGGGC GCCAATTAA
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Protein sequence | MAMSVGGKKS GRGRFARQPM SEINVTPVVD VMLVLLIVFM VAAPLLTVGV PVDLPKTQAA PISGDNEPLT ITINGEGTIF VQETQVEADA LVEQLLAIAE NGYEQRIFVR ADSGISYGKV MDVMGRISSS GFSKVGLVTE TDTAPAKKPG AN
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