Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_2114 |
Symbol | |
ID | 5456185 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 2296581 |
End bp | 2297327 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640877691 |
Product | hypothetical protein |
Protein accession | YP_001413385 |
Protein GI | 154252561 |
COG category | [S] Function unknown |
COG ID | [COG0217] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR01033] DNA-binding regulatory protein, YebC/PmpR family |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.308852 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 0.355584 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGGCC ACTCACAATT CAAGAACATC ATGTACCGCA AGGGCGCGCA GGATAAGAAG CGCTCCAAGC TGTTCGCTAA GCTGGCCAAG GAAATTACCG TGGCGGCCAA GATGGGCCTG CCTGACCCTG AGTACAATCC GCGGTTGCGC GCGGCGATCC AGGCCGCCCG TGTCGAGAAT ATGCCCAAGG ACAATATCGA GCGCGCGATC AAAAAGAGCT CGGACCAGGG TGGAGAAAAC TACGAAGAAG TGCGGTACGA GGGCTTTGGG CCCGGCGGCA TCGGTGTCAT CGTCGAGACC CTGACCGACA ATCGCAACCG CACGGCAGGC GAAGTGCGGT CGATCTTCAC CAAGAATGGC GGCAATCTCG GCGAAACGGG CGCCGTCTCG TTCATGTTCG ACCGGCTCGG CCTCATCGAA TATCCGGCAG ACGCCGCCAG TGCCGATGAC ATGATCGAGG CCGCGATCGA GGCGGGAGCC GATGATTGCC AGTCGGGCGA GGCAGGCCAC GAACTCTATT GTGCGCCCGA TGCACTGCAT GAGGTGGCGC AAGGCCTTGA GTCGAAATTC GGCGAGGCGC GGGCGGCCCG CATCGTCTGG AAGCCGCAAA ACACGATCGC ACTCGAAGAC GAAAAGGCCG AGACCGTCCT AAAAATGCTC GAAGCGCTGG ACGACAACGA CGATGTGCAG CAGGTTTATG CGAACTTCGA GATGTCCGAT TCGCTGATGG AGAAGATGTC CGCCTGA
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Protein sequence | MAGHSQFKNI MYRKGAQDKK RSKLFAKLAK EITVAAKMGL PDPEYNPRLR AAIQAARVEN MPKDNIERAI KKSSDQGGEN YEEVRYEGFG PGGIGVIVET LTDNRNRTAG EVRSIFTKNG GNLGETGAVS FMFDRLGLIE YPADAASADD MIEAAIEAGA DDCQSGEAGH ELYCAPDALH EVAQGLESKF GEARAARIVW KPQNTIALED EKAETVLKML EALDDNDDVQ QVYANFEMSD SLMEKMSA
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