Gene Plav_2113 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_2113 
Symbol 
ID5453627 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp2295199 
End bp2296224 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content57% 
IMG OID640877690 
Producthypothetical protein 
Protein accessionYP_001413384 
Protein GI154252560 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.384656 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value0.405303 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGATCG TCATTGCAGG AAACTATAAC GAGAAACGGG CGGGCGCGAA CTACTACGCG 
ACGGTGCGGA AGCTCACCAA CGGCTTCATT CGCAACGGGC ATCATGTCAT GCCGTTCAGT
GACCGGGATG TGGCGCGCGA AGTGCATCGA TGGGGCATCG GCCGGGGGGG CGATGCATAT
GCAAACAGCC GCCTTGTCGA CCTTTGCGAT AATTTTGAAC CCCATCTCCT CATTCTTTTT
CATGCCGACA GAATATCCAA CGACACGGTG CGCAAGATAC GCAGCAGAAT TCCGGGGCTA
AGCGTTTCTG TCGTCAATCT CGATCCGATT TTCCTCCCCG AGAACCCGCC GCGCATCAAG
CGGTTCGCCG AGGTTGCGGA TACGACCTTC ATCACGACCG CCGGAGAGAG GCTGAAGGAA
TTTGCGACCT CCACGCATGG CGTGGCGTTC ATTCCCAACC CTGCCGATCC TTCCATAGAG
ACGCTGAAGG GATTTGCGCG CGAGGATCAG CCGTTCGATT TTCTGTGCAC GATAGGCACA
GAGCGGACGA CGCCCTGGCG CGGCCAGATG ATGCGGGACA TAGAGGCGCG GGTTCCCGAA
GCGCGATATT CGTTCCATGG TCTCGAAGGC AGGCCCTATC TGCAGGGCCG CGATTATCTG
GAGGCGCTTT CATCCGCGAA GATGGGGCTG AACATCAACC GGGCCGACGA TCATTATCTC
TATTCGTCCG ATCGCTTTGC GCAATATGCC GGAAATGGAC TTCTCGTCTT CGTGGCGCGG
TCGACAGGCT ATGACGAAAT TTTCTCCGAT GAAGAATTCG TCTTTTTTCG CGATCTGGAC
GAGTTGGCGG ACAAGCTGCG TTACTTTCTG AAAAACGATG GGGAGCGGCA GCGCATCGCC
CGCAATGGGT ATGAGCGTTA CCACGCTTTT TTCAGCGAGC GGCTGGTGGC GCGCTACATA
GAGGATGTGG CGATGAGGCG CCCGCTTTCG GAAGATTACG CCTGGCCCAC GGAAGTTCAC
CGCTGA
 
Protein sequence
MRIVIAGNYN EKRAGANYYA TVRKLTNGFI RNGHHVMPFS DRDVAREVHR WGIGRGGDAY 
ANSRLVDLCD NFEPHLLILF HADRISNDTV RKIRSRIPGL SVSVVNLDPI FLPENPPRIK
RFAEVADTTF ITTAGERLKE FATSTHGVAF IPNPADPSIE TLKGFAREDQ PFDFLCTIGT
ERTTPWRGQM MRDIEARVPE ARYSFHGLEG RPYLQGRDYL EALSSAKMGL NINRADDHYL
YSSDRFAQYA GNGLLVFVAR STGYDEIFSD EEFVFFRDLD ELADKLRYFL KNDGERQRIA
RNGYERYHAF FSERLVARYI EDVAMRRPLS EDYAWPTEVH R